Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.1□□□□□ -0.15
VSX2P58304 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.1□□□□□ -0.15
VSX2P58304 AC018735.1-201ENST00000437208 1502 ntBASIC14.1□□□□□ -0.15
VSX2P58304 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VSX2P58304 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.1□□□□□ -0.15
VSX2P58304 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.1□□□□□ -0.15
VSX2P58304 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VSX2P58304 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VSX2P58304 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VSX2P58304 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.09□□□□□ -0.15
VSX2P58304 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.09□□□□□ -0.15
VSX2P58304 AC079781.5-202ENST00000641784 3743 ntBASIC14.09□□□□□ -0.15
VSX2P58304 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.09□□□□□ -0.15
VSX2P58304 AC015656.1-201ENST00000624209 3578 ntBASIC14.09□□□□□ -0.15
VSX2P58304 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.09□□□□□ -0.15
VSX2P58304 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VSX2P58304 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
VSX2P58304 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.09□□□□□ -0.15
VSX2P58304 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.09□□□□□ -0.15
VSX2P58304 AC006033.1-201ENST00000440505 426 ntBASIC14.09□□□□□ -0.15
VSX2P58304 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.09□□□□□ -0.15
VSX2P58304 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.09□□□□□ -0.15
VSX2P58304 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.09□□□□□ -0.15
VSX2P58304 MIR4783-201ENST00000580343 82 ntBASIC14.09□□□□□ -0.15
VSX2P58304 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 AC132192.2-201ENST00000596206 1147 ntBASIC14.09□□□□□ -0.15
VSX2P58304 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.09□□□□□ -0.15
VSX2P58304 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.09□□□□□ -0.15
VSX2P58304 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.09□□□□□ -0.15
VSX2P58304 AL162426.1-201ENST00000624141 743 ntBASIC14.09□□□□□ -0.15
VSX2P58304 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
VSX2P58304 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.09□□□□□ -0.15
VSX2P58304 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.09□□□□□ -0.15
VSX2P58304 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.09□□□□□ -0.15
VSX2P58304 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VSX2P58304 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
VSX2P58304 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VSX2P58304 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VSX2P58304 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VSX2P58304 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VSX2P58304 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VSX2P58304 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
VSX2P58304 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
VSX2P58304 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
VSX2P58304 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.08□□□□□ -0.16
VSX2P58304 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.08□□□□□ -0.16
VSX2P58304 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.08□□□□□ -0.16
VSX2P58304 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
VSX2P58304 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.08□□□□□ -0.16
VSX2P58304 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.08□□□□□ -0.16
VSX2P58304 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.08□□□□□ -0.16
VSX2P58304 RNMTL1P1-201ENST00000454103 560 ntBASIC14.08□□□□□ -0.16
VSX2P58304 AC099548.2-209ENST00000480264 625 ntBASIC14.08□□□□□ -0.16
VSX2P58304 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.08□□□□□ -0.16
VSX2P58304 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.08□□□□□ -0.16
VSX2P58304 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.08□□□□□ -0.16
VSX2P58304 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms