Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.89□□□□□ -0.19
WNT3P56703 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
WNT3P56703 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
WNT3P56703 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
WNT3P56703 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
WNT3P56703 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
WNT3P56703 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
WNT3P56703 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
WNT3P56703 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.89□□□□□ -0.19
WNT3P56703 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
WNT3P56703 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
WNT3P56703 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
WNT3P56703 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
WNT3P56703 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
WNT3P56703 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
WNT3P56703 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
WNT3P56703 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.89□□□□□ -0.19
WNT3P56703 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
WNT3P56703 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
WNT3P56703 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
WNT3P56703 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.88□□□□□ -0.19
WNT3P56703 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.88□□□□□ -0.19
WNT3P56703 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.88□□□□□ -0.19
WNT3P56703 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
WNT3P56703 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.88□□□□□ -0.19
WNT3P56703 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.88□□□□□ -0.19
WNT3P56703 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.88□□□□□ -0.19
WNT3P56703 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.88□□□□□ -0.19
WNT3P56703 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
WNT3P56703 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.88□□□□□ -0.19
WNT3P56703 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.88□□□□□ -0.19
WNT3P56703 AC025279.2-201ENST00000569730 653 ntBASIC13.88□□□□□ -0.19
WNT3P56703 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
WNT3P56703 AL033527.4-201ENST00000641026 673 ntBASIC13.88□□□□□ -0.19
WNT3P56703 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
WNT3P56703 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 REXO1L6P-201ENST00000603433 1515 ntBASIC13.88□□□□□ -0.19
WNT3P56703 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
WNT3P56703 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.88□□□□□ -0.19
WNT3P56703 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
WNT3P56703 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
WNT3P56703 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.87□□□□□ -0.19
WNT3P56703 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
WNT3P56703 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.87□□□□□ -0.19
WNT3P56703 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.87□□□□□ -0.19
WNT3P56703 AC105206.1-202ENST00000314927 2368 ntBASIC13.87□□□□□ -0.19
WNT3P56703 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
WNT3P56703 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
WNT3P56703 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 AL157996.1-201ENST00000624684 2299 ntBASIC13.87□□□□□ -0.19
WNT3P56703 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.87□□□□□ -0.19
WNT3P56703 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.87□□□□□ -0.19
WNT3P56703 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.87□□□□□ -0.19
WNT3P56703 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.87□□□□□ -0.19
WNT3P56703 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
WNT3P56703 AC004945.1-201ENST00000416738 983 ntBASIC13.87□□□□□ -0.19
WNT3P56703 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms