Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.1□□□□□ -0.31
GFRA1P56159 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.1□□□□□ -0.31
GFRA1P56159 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
GFRA1P56159 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
GFRA1P56159 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.1□□□□□ -0.31
GFRA1P56159 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.1□□□□□ -0.31
GFRA1P56159 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
GFRA1P56159 SLC25A24P2-201ENST00000415059 510 ntBASIC13.1□□□□□ -0.31
GFRA1P56159 OR2R1P-201ENST00000441404 914 ntBASIC13.1□□□□□ -0.31
GFRA1P56159 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 AL596276.2-201ENST00000447525 331 ntBASIC13.1□□□□□ -0.31
GFRA1P56159 IGHJ2P-201ENST00000454480 60 ntBASIC13.1□□□□□ -0.31
GFRA1P56159 RN7SL11P-201ENST00000471305 293 ntBASIC13.1□□□□□ -0.31
GFRA1P56159 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.1□□□□□ -0.31
GFRA1P56159 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.1□□□□□ -0.31
GFRA1P56159 PGAM1P5-201ENST00000548011 764 ntBASIC13.1□□□□□ -0.31
GFRA1P56159 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.1□□□□□ -0.31
GFRA1P56159 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.1□□□□□ -0.31
GFRA1P56159 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.1□□□□□ -0.31
GFRA1P56159 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
GFRA1P56159 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.1□□□□□ -0.31
GFRA1P56159 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
GFRA1P56159 AP001505.2-201ENST00000616815 443 ntBASIC13.1□□□□□ -0.31
GFRA1P56159 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 AC092299.1-201ENST00000632679 757 ntBASIC13.1□□□□□ -0.31
GFRA1P56159 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
GFRA1P56159 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
GFRA1P56159 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GFRA1P56159 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
GFRA1P56159 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GFRA1P56159 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.09□□□□□ -0.31
GFRA1P56159 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
GFRA1P56159 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.09□□□□□ -0.31
GFRA1P56159 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
GFRA1P56159 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GFRA1P56159 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.09□□□□□ -0.31
GFRA1P56159 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.09□□□□□ -0.31
GFRA1P56159 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 AL662890.1-201ENST00000396818 632 ntBASIC13.09□□□□□ -0.31
GFRA1P56159 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.09□□□□□ -0.31
GFRA1P56159 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.09□□□□□ -0.31
GFRA1P56159 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 AC024681.1-201ENST00000521917 487 ntBASIC13.09□□□□□ -0.31
GFRA1P56159 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
GFRA1P56159 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.09□□□□□ -0.31
GFRA1P56159 AL161670.2-201ENST00000557650 1227 ntBASIC13.09□□□□□ -0.31
GFRA1P56159 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.09□□□□□ -0.31
GFRA1P56159 AC005586.2-201ENST00000563946 837 ntBASIC13.09□□□□□ -0.31
GFRA1P56159 AC124068.2-201ENST00000569473 1109 ntBASIC13.09□□□□□ -0.31
GFRA1P56159 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.09□□□□□ -0.31
GFRA1P56159 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.09□□□□□ -0.31
GFRA1P56159 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
GFRA1P56159 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
GFRA1P56159 AL589935.2-201ENST00000616471 1231 ntBASIC13.09□□□□□ -0.31
GFRA1P56159 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.09□□□□□ -0.31
GFRA1P56159 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GFRA1P56159 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms