Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.64■□□□□ 0.57
BRPF1P55201 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 GRK6P1-201ENST00000400595 1711 ntBASIC18.63■□□□□ 0.57
BRPF1P55201 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 NORAD-201ENST00000565493 5339 ntBASIC18.63■□□□□ 0.57
BRPF1P55201 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC18.63■□□□□ 0.57
BRPF1P55201 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.63■□□□□ 0.57
BRPF1P55201 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 MIR33B-201ENST00000385104 96 ntBASIC18.63■□□□□ 0.57
BRPF1P55201 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.63■□□□□ 0.57
BRPF1P55201 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.63■□□□□ 0.57
BRPF1P55201 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.63■□□□□ 0.57
BRPF1P55201 TUBB8P8-201ENST00000458717 1058 ntBASIC18.63■□□□□ 0.57
BRPF1P55201 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.63■□□□□ 0.57
BRPF1P55201 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.63■□□□□ 0.57
BRPF1P55201 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 AL096828.3-201ENST00000615354 462 ntBASIC18.63■□□□□ 0.57
BRPF1P55201 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.63■□□□□ 0.57
BRPF1P55201 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC18.63■□□□□ 0.57
BRPF1P55201 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 CYP4F23P-201ENST00000593402 1579 ntBASIC18.63■□□□□ 0.57
BRPF1P55201 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.63■□□□□ 0.57
BRPF1P55201 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRPF1P55201 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.63■□□□□ 0.57
BRPF1P55201 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
BRPF1P55201 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
BRPF1P55201 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.62■□□□□ 0.57
BRPF1P55201 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 VDAC1P1-201ENST00000439229 848 ntBASIC18.62■□□□□ 0.57
BRPF1P55201 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.62■□□□□ 0.57
BRPF1P55201 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
BRPF1P55201 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 AC100827.2-201ENST00000563214 1194 ntBASIC18.62■□□□□ 0.57
BRPF1P55201 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.62■□□□□ 0.57
BRPF1P55201 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 AL023803.2-201ENST00000620080 638 ntBASIC18.62■□□□□ 0.57
BRPF1P55201 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.62■□□□□ 0.57
BRPF1P55201 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 AC144522.1-201ENST00000625111 1658 ntBASIC18.62■□□□□ 0.57
BRPF1P55201 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
BRPF1P55201 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRPF1P55201 INTS4P1-203ENST00000641008 3683 ntBASIC18.62■□□□□ 0.57
BRPF1P55201 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
BRPF1P55201 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BRPF1P55201 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 HSPA8P5-201ENST00000456928 2069 ntBASIC18.61■□□□□ 0.57
BRPF1P55201 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRPF1P55201 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms