Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AC023824.1-201ENST00000562945 2975 ntBASIC13.73□□□□□ -0.21
EFNA3P52797 LINC02228-204ENST00000642115 2962 ntBASIC13.73□□□□□ -0.21
EFNA3P52797 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
EFNA3P52797 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
EFNA3P52797 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
EFNA3P52797 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNA3P52797 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNA3P52797 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNA3P52797 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNA3P52797 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNA3P52797 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
EFNA3P52797 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNA3P52797 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.72□□□□□ -0.21
EFNA3P52797 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.72□□□□□ -0.21
EFNA3P52797 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.72□□□□□ -0.21
EFNA3P52797 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
EFNA3P52797 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNA3P52797 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
EFNA3P52797 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
EFNA3P52797 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.72□□□□□ -0.21
EFNA3P52797 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.72□□□□□ -0.21
EFNA3P52797 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.72□□□□□ -0.21
EFNA3P52797 FAM58BP-201ENST00000439056 645 ntBASIC13.72□□□□□ -0.21
EFNA3P52797 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNA3P52797 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.72□□□□□ -0.21
EFNA3P52797 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
EFNA3P52797 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.72□□□□□ -0.21
EFNA3P52797 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.72□□□□□ -0.21
EFNA3P52797 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNA3P52797 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
EFNA3P52797 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNA3P52797 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.72□□□□□ -0.21
EFNA3P52797 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.72□□□□□ -0.21
EFNA3P52797 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNA3P52797 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA3P52797 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
EFNA3P52797 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNA3P52797 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNA3P52797 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNA3P52797 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
EFNA3P52797 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNA3P52797 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNA3P52797 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNA3P52797 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
EFNA3P52797 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNA3P52797 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
EFNA3P52797 AC097359.2-201ENST00000604992 2389 ntBASIC13.71□□□□□ -0.21
EFNA3P52797 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
EFNA3P52797 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNA3P52797 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
EFNA3P52797 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNA3P52797 KRT18P36-201ENST00000411618 1276 ntBASIC13.71□□□□□ -0.21
EFNA3P52797 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA3P52797 AL035414.1-201ENST00000451327 857 ntBASIC13.71□□□□□ -0.21
EFNA3P52797 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNA3P52797 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNA3P52797 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.71□□□□□ -0.21
EFNA3P52797 AC125604.1-201ENST00000496255 707 ntBASIC13.71□□□□□ -0.21
EFNA3P52797 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNA3P52797 AC106794.1-201ENST00000506935 792 ntBASIC13.71□□□□□ -0.21
EFNA3P52797 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.71□□□□□ -0.21
EFNA3P52797 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.71□□□□□ -0.21
EFNA3P52797 AL132994.2-201ENST00000603120 687 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms