Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF140P52738 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.56□□□□□ -0.08
ZNF140P52738 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ZNF140P52738 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF140P52738 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF140P52738 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF140P52738 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
ZNF140P52738 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ZNF140P52738 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF140P52738 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF140P52738 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF140P52738 REXO1L6P-201ENST00000603433 1515 ntBASIC14.56□□□□□ -0.08
ZNF140P52738 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF140P52738 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.56□□□□□ -0.08
ZNF140P52738 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF140P52738 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF140P52738 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ZNF140P52738 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF140P52738 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF140P52738 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF140P52738 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF140P52738 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 GOLGA2P4-201ENST00000441462 777 ntBASIC14.55□□□□□ -0.08
ZNF140P52738 AC012441.2-201ENST00000444843 739 ntBASIC14.55□□□□□ -0.08
ZNF140P52738 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF140P52738 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF140P52738 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF140P52738 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF140P52738 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF140P52738 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.55□□□□□ -0.08
ZNF140P52738 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
ZNF140P52738 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF140P52738 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.55□□□□□ -0.08
ZNF140P52738 AL096828.3-201ENST00000615354 462 ntBASIC14.55□□□□□ -0.08
ZNF140P52738 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF140P52738 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.55□□□□□ -0.08
ZNF140P52738 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF140P52738 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ZNF140P52738 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ZNF140P52738 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
ZNF140P52738 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF140P52738 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
ZNF140P52738 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF140P52738 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF140P52738 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
ZNF140P52738 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
ZNF140P52738 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ZNF140P52738 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ZNF140P52738 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ZNF140P52738 MIR663B-201ENST00000408361 115 ntBASIC14.54□□□□□ -0.08
ZNF140P52738 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.54□□□□□ -0.08
ZNF140P52738 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF140P52738 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF140P52738 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.54□□□□□ -0.08
ZNF140P52738 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.54□□□□□ -0.08
ZNF140P52738 AC005962.1-201ENST00000584100 773 ntBASIC14.54□□□□□ -0.08
ZNF140P52738 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF140P52738 AC009884.2-201ENST00000603110 324 ntBASIC14.54□□□□□ -0.08
ZNF140P52738 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
ZNF140P52738 TUBB8P4-201ENST00000511806 1324 ntBASIC14.54□□□□□ -0.08
ZNF140P52738 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF140P52738 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.54□□□□□ -0.08
ZNF140P52738 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF140P52738 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF140P52738 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF140P52738 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms