Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC107918.4-201ENST00000641966 3141 ntBASIC13.51□□□□□ -0.25
RFC3P40938 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.51□□□□□ -0.25
RFC3P40938 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.51□□□□□ -0.25
RFC3P40938 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.51□□□□□ -0.25
RFC3P40938 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
RFC3P40938 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RFC3P40938 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.51□□□□□ -0.25
RFC3P40938 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.51□□□□□ -0.25
RFC3P40938 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.51□□□□□ -0.25
RFC3P40938 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.51□□□□□ -0.25
RFC3P40938 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.51□□□□□ -0.25
RFC3P40938 SPTLC1P5-201ENST00000450718 252 ntBASIC13.51□□□□□ -0.25
RFC3P40938 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
RFC3P40938 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
RFC3P40938 AC009955.4-201ENST00000597192 544 ntBASIC13.51□□□□□ -0.25
RFC3P40938 AC091544.8-201ENST00000619490 361 ntBASIC13.51□□□□□ -0.25
RFC3P40938 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.51□□□□□ -0.25
RFC3P40938 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.51□□□□□ -0.25
RFC3P40938 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.51□□□□□ -0.25
RFC3P40938 CR383656.2-201ENST00000548656 2254 ntBASIC13.51□□□□□ -0.25
RFC3P40938 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFC3P40938 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RFC3P40938 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
RFC3P40938 ACE3P-201ENST00000423435 1973 ntBASIC13.51□□□□□ -0.25
RFC3P40938 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RFC3P40938 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RFC3P40938 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RFC3P40938 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RFC3P40938 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.5□□□□□ -0.25
RFC3P40938 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RFC3P40938 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.5□□□□□ -0.25
RFC3P40938 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
RFC3P40938 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.5□□□□□ -0.25
RFC3P40938 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.5□□□□□ -0.25
RFC3P40938 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.5□□□□□ -0.25
RFC3P40938 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.5□□□□□ -0.25
RFC3P40938 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.5□□□□□ -0.25
RFC3P40938 KLF2P1-201ENST00000447438 1042 ntBASIC13.5□□□□□ -0.25
RFC3P40938 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.5□□□□□ -0.25
RFC3P40938 RN7SL11P-201ENST00000471305 293 ntBASIC13.5□□□□□ -0.25
RFC3P40938 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.5□□□□□ -0.25
RFC3P40938 AC106794.1-201ENST00000506935 792 ntBASIC13.5□□□□□ -0.25
RFC3P40938 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.5□□□□□ -0.25
RFC3P40938 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
RFC3P40938 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.5□□□□□ -0.25
RFC3P40938 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.5□□□□□ -0.25
RFC3P40938 DUX4L46-201ENST00000566845 751 ntBASIC13.5□□□□□ -0.25
RFC3P40938 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.5□□□□□ -0.25
RFC3P40938 BNIP3P13-201ENST00000599968 566 ntBASIC13.5□□□□□ -0.25
RFC3P40938 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.5□□□□□ -0.25
RFC3P40938 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.5□□□□□ -0.25
RFC3P40938 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.5□□□□□ -0.25
RFC3P40938 AL023803.2-201ENST00000620080 638 ntBASIC13.5□□□□□ -0.25
RFC3P40938 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.5□□□□□ -0.25
RFC3P40938 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.5□□□□□ -0.25
RFC3P40938 AC004923.1-202ENST00000642106 209 ntBASIC13.5□□□□□ -0.25
RFC3P40938 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
RFC3P40938 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.5□□□□□ -0.25
RFC3P40938 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
RFC3P40938 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RFC3P40938 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.5□□□□□ -0.25
RFC3P40938 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.5□□□□□ -0.25
RFC3P40938 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms