Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN1P35523 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN1P35523 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCN1P35523 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC16.78■□□□□ 0.28
CLCN1P35523 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLCN1P35523 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLCN1P35523 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 AC007787.1-201ENST00000588095 1583 ntBASIC16.78■□□□□ 0.28
CLCN1P35523 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CLCN1P35523 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCN1P35523 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.78■□□□□ 0.28
CLCN1P35523 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCN1P35523 AC107890.1-201ENST00000422478 521 ntBASIC16.78■□□□□ 0.28
CLCN1P35523 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN1P35523 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN1P35523 AC027369.6-201ENST00000525520 931 ntBASIC16.78■□□□□ 0.28
CLCN1P35523 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN1P35523 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCN1P35523 AKR1B10P2-201ENST00000577332 927 ntBASIC16.78■□□□□ 0.28
CLCN1P35523 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN1P35523 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCN1P35523 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CLCN1P35523 AC125807.2-201ENST00000513358 3514 ntBASIC16.78■□□□□ 0.28
CLCN1P35523 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
CLCN1P35523 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CLCN1P35523 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
CLCN1P35523 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLCN1P35523 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLCN1P35523 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLCN1P35523 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN1P35523 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CLCN1P35523 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CLCN1P35523 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCN1P35523 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CLCN1P35523 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CLCN1P35523 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CLCN1P35523 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CLCN1P35523 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCN1P35523 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.77■□□□□ 0.28
CLCN1P35523 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCN1P35523 AC136604.1-202ENST00000425471 771 ntBASIC16.77■□□□□ 0.28
CLCN1P35523 METTL21AP1-201ENST00000438852 635 ntBASIC16.77■□□□□ 0.28
CLCN1P35523 RPL13P2-201ENST00000440687 659 ntBASIC16.77■□□□□ 0.28
CLCN1P35523 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN1P35523 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN1P35523 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN1P35523 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCN1P35523 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN1P35523 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN1P35523 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.77■□□□□ 0.28
CLCN1P35523 LINC01115-203ENST00000606068 577 ntBASIC16.77■□□□□ 0.28
CLCN1P35523 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.77■□□□□ 0.28
CLCN1P35523 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN1P35523 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC16.77■□□□□ 0.28
CLCN1P35523 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.77■□□□□ 0.27
CLCN1P35523 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.77■□□□□ 0.27
CLCN1P35523 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC16.77■□□□□ 0.27
CLCN1P35523 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
CLCN1P35523 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN1P35523 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms