Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.54□□□□□ -0.24
SHC1P29353 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.54□□□□□ -0.24
SHC1P29353 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.54□□□□□ -0.24
SHC1P29353 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.54□□□□□ -0.24
SHC1P29353 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.54□□□□□ -0.24
SHC1P29353 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.54□□□□□ -0.24
SHC1P29353 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SHC1P29353 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.54□□□□□ -0.24
SHC1P29353 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SHC1P29353 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SHC1P29353 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.53□□□□□ -0.24
SHC1P29353 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SHC1P29353 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.53□□□□□ -0.24
SHC1P29353 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SHC1P29353 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SHC1P29353 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.53□□□□□ -0.24
SHC1P29353 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SHC1P29353 MIR1202-201ENST00000408529 83 ntBASIC13.53□□□□□ -0.24
SHC1P29353 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.53□□□□□ -0.24
SHC1P29353 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SHC1P29353 AC017083.2-201ENST00000608069 979 ntBASIC13.53□□□□□ -0.24
SHC1P29353 AC138466.3-201ENST00000619983 221 ntBASIC13.53□□□□□ -0.24
SHC1P29353 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.53□□□□□ -0.24
SHC1P29353 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.53□□□□□ -0.24
SHC1P29353 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SHC1P29353 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.53□□□□□ -0.24
SHC1P29353 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.53□□□□□ -0.24
SHC1P29353 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.53□□□□□ -0.24
SHC1P29353 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SHC1P29353 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SHC1P29353 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.53□□□□□ -0.24
SHC1P29353 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SHC1P29353 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SHC1P29353 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.53□□□□□ -0.24
SHC1P29353 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHC1P29353 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SHC1P29353 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.53□□□□□ -0.24
SHC1P29353 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SHC1P29353 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.52□□□□□ -0.24
SHC1P29353 AC089987.1-201ENST00000551654 2209 ntBASIC13.52□□□□□ -0.24
SHC1P29353 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHC1P29353 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SHC1P29353 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SHC1P29353 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHC1P29353 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHC1P29353 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SHC1P29353 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 AC006001.1-201ENST00000325130 474 ntBASIC13.52□□□□□ -0.25
SHC1P29353 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.52□□□□□ -0.25
SHC1P29353 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.52□□□□□ -0.25
SHC1P29353 AC099336.1-201ENST00000417053 1171 ntBASIC13.52□□□□□ -0.25
SHC1P29353 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.52□□□□□ -0.25
SHC1P29353 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.52□□□□□ -0.25
SHC1P29353 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 MESTP3-201ENST00000503460 968 ntBASIC13.52□□□□□ -0.25
SHC1P29353 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.52□□□□□ -0.25
SHC1P29353 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.52□□□□□ -0.25
SHC1P29353 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.52□□□□□ -0.25
SHC1P29353 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.52□□□□□ -0.25
SHC1P29353 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms