Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.32□□□□□ -0.28
GDF1P27539 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
GDF1P27539 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GDF1P27539 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
GDF1P27539 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
GDF1P27539 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.32□□□□□ -0.28
GDF1P27539 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.32□□□□□ -0.28
GDF1P27539 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.32□□□□□ -0.28
GDF1P27539 AL157407.1-201ENST00000435784 904 ntBASIC13.32□□□□□ -0.28
GDF1P27539 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.32□□□□□ -0.28
GDF1P27539 AC022217.1-201ENST00000521069 738 ntBASIC13.32□□□□□ -0.28
GDF1P27539 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.32□□□□□ -0.28
GDF1P27539 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.32□□□□□ -0.28
GDF1P27539 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.32□□□□□ -0.28
GDF1P27539 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.32□□□□□ -0.28
GDF1P27539 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.32□□□□□ -0.28
GDF1P27539 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.32□□□□□ -0.28
GDF1P27539 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.32□□□□□ -0.28
GDF1P27539 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.32□□□□□ -0.28
GDF1P27539 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.32□□□□□ -0.28
GDF1P27539 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.32□□□□□ -0.28
GDF1P27539 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
GDF1P27539 AC139712.1-201ENST00000378256 1875 ntBASIC13.31□□□□□ -0.28
GDF1P27539 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.31□□□□□ -0.28
GDF1P27539 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
GDF1P27539 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.31□□□□□ -0.28
GDF1P27539 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
GDF1P27539 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
GDF1P27539 C8orf49-201ENST00000525043 1968 ntBASIC13.31□□□□□ -0.28
GDF1P27539 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
GDF1P27539 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 AL008707.1-201ENST00000422498 534 ntBASIC13.31□□□□□ -0.28
GDF1P27539 AL645933.1-201ENST00000440087 609 ntBASIC13.31□□□□□ -0.28
GDF1P27539 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.31□□□□□ -0.28
GDF1P27539 IGHJ2P-201ENST00000454480 60 ntBASIC13.31□□□□□ -0.28
GDF1P27539 RN7SL11P-201ENST00000471305 293 ntBASIC13.31□□□□□ -0.28
GDF1P27539 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 MARK2P5-201ENST00000507649 634 ntBASIC13.31□□□□□ -0.28
GDF1P27539 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.31□□□□□ -0.28
GDF1P27539 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.31□□□□□ -0.28
GDF1P27539 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.31□□□□□ -0.28
GDF1P27539 AC026740.1-201ENST00000607068 791 ntBASIC13.31□□□□□ -0.28
GDF1P27539 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
GDF1P27539 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.31□□□□□ -0.28
GDF1P27539 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.31□□□□□ -0.28
GDF1P27539 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
GDF1P27539 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GDF1P27539 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
GDF1P27539 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.31□□□□□ -0.28
GDF1P27539 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
GDF1P27539 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 KRT8P28-201ENST00000433288 1390 ntBASIC13.31□□□□□ -0.28
GDF1P27539 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.31□□□□□ -0.28
GDF1P27539 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.31□□□□□ -0.28
GDF1P27539 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDF1P27539 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
GDF1P27539 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 AC009093.10-201ENST00000641956 1442 ntBASIC13.3□□□□□ -0.28
GDF1P27539 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms