Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.35□□□□□ -0.59
RAB4AP20338 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
RAB4AP20338 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB4AP20338 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB4AP20338 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC11.34□□□□□ -0.59
RAB4AP20338 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.34□□□□□ -0.59
RAB4AP20338 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.34□□□□□ -0.59
RAB4AP20338 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.34□□□□□ -0.59
RAB4AP20338 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.34□□□□□ -0.59
RAB4AP20338 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.34□□□□□ -0.59
RAB4AP20338 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 MOK-208ENST00000519058 917 ntTSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.34□□□□□ -0.59
RAB4AP20338 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 AL049597.2-201ENST00000565575 961 ntBASIC11.34□□□□□ -0.59
RAB4AP20338 AC087388.1-201ENST00000571370 1112 ntBASIC11.34□□□□□ -0.59
RAB4AP20338 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.34□□□□□ -0.59
RAB4AP20338 CLEC4GP1-201ENST00000596555 870 ntBASIC11.34□□□□□ -0.59
RAB4AP20338 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.34□□□□□ -0.59
RAB4AP20338 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
RAB4AP20338 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 AC015819.3-201ENST00000624305 2674 ntBASIC11.34□□□□□ -0.59
RAB4AP20338 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC11.34□□□□□ -0.59
RAB4AP20338 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 POM121L6P-201ENST00000441186 1826 ntBASIC11.34□□□□□ -0.59
RAB4AP20338 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
RAB4AP20338 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
RAB4AP20338 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
RAB4AP20338 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 DDO-201ENST00000368923 1953 ntTSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
RAB4AP20338 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
RAB4AP20338 NBN-203ENST00000409330 4523 ntTSL 5 BASIC11.34□□□□□ -0.59
RAB4AP20338 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB4AP20338 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.33□□□□□ -0.59
RAB4AP20338 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC11.33□□□□□ -0.59
RAB4AP20338 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
RAB4AP20338 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
RAB4AP20338 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
RAB4AP20338 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
RAB4AP20338 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 AC018529.2-202ENST00000611482 3087 ntBASIC11.33□□□□□ -0.6
RAB4AP20338 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB4AP20338 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.33□□□□□ -0.6
RAB4AP20338 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.33□□□□□ -0.6
RAB4AP20338 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.33□□□□□ -0.6
RAB4AP20338 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
RAB4AP20338 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
RAB4AP20338 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
RAB4AP20338 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.33□□□□□ -0.6
RAB4AP20338 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.33□□□□□ -0.6
RAB4AP20338 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB4AP20338 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.33□□□□□ -0.6
RAB4AP20338 AC098859.1-201ENST00000502915 1238 ntBASIC11.33□□□□□ -0.6
RAB4AP20338 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB4AP20338 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.33□□□□□ -0.6
RAB4AP20338 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms