Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.34□□□□□ -0.43
CXCL3P19876 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.34□□□□□ -0.43
CXCL3P19876 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CXCL3P19876 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.34□□□□□ -0.43
CXCL3P19876 AL928654.5-201ENST00000624831 2501 ntBASIC12.34□□□□□ -0.43
CXCL3P19876 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CXCL3P19876 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CXCL3P19876 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CXCL3P19876 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CXCL3P19876 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CXCL3P19876 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.34□□□□□ -0.43
CXCL3P19876 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 KRT18P64-201ENST00000434946 1219 ntBASIC12.34□□□□□ -0.43
CXCL3P19876 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.34□□□□□ -0.43
CXCL3P19876 AC009947.1-201ENST00000444350 727 ntBASIC12.34□□□□□ -0.43
CXCL3P19876 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.34□□□□□ -0.43
CXCL3P19876 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.34□□□□□ -0.43
CXCL3P19876 AC093909.1-201ENST00000504731 1122 ntBASIC12.34□□□□□ -0.43
CXCL3P19876 SLED1-202ENST00000512051 380 ntBASIC12.34□□□□□ -0.43
CXCL3P19876 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.34□□□□□ -0.43
CXCL3P19876 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.34□□□□□ -0.43
CXCL3P19876 UNC93B6-202ENST00000528242 690 ntBASIC12.34□□□□□ -0.43
CXCL3P19876 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CXCL3P19876 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.34□□□□□ -0.43
CXCL3P19876 AC096734.2-201ENST00000562054 433 ntBASIC12.34□□□□□ -0.43
CXCL3P19876 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.34□□□□□ -0.43
CXCL3P19876 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.34□□□□□ -0.43
CXCL3P19876 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.34□□□□□ -0.43
CXCL3P19876 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.34□□□□□ -0.43
CXCL3P19876 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
CXCL3P19876 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.34□□□□□ -0.43
CXCL3P19876 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.34□□□□□ -0.43
CXCL3P19876 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CXCL3P19876 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.34□□□□□ -0.43
CXCL3P19876 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.34□□□□□ -0.43
CXCL3P19876 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.34□□□□□ -0.43
CXCL3P19876 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.34□□□□□ -0.43
CXCL3P19876 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CXCL3P19876 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.34□□□□□ -0.43
CXCL3P19876 LINC02486-201ENST00000604157 3000 ntBASIC12.34□□□□□ -0.43
CXCL3P19876 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.34□□□□□ -0.43
CXCL3P19876 TUBB8P4-201ENST00000511806 1324 ntBASIC12.34□□□□□ -0.43
CXCL3P19876 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.34□□□□□ -0.43
CXCL3P19876 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL3P19876 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.33□□□□□ -0.43
CXCL3P19876 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CXCL3P19876 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CXCL3P19876 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
CXCL3P19876 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
CXCL3P19876 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CXCL3P19876 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.33□□□□□ -0.44
CXCL3P19876 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.33□□□□□ -0.44
CXCL3P19876 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CXCL3P19876 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CXCL3P19876 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.33□□□□□ -0.44
CXCL3P19876 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.33□□□□□ -0.44
CXCL3P19876 PEG13-201ENST00000631594 5667 ntBASIC12.33□□□□□ -0.44
CXCL3P19876 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.33□□□□□ -0.44
CXCL3P19876 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
CXCL3P19876 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.33□□□□□ -0.44
CXCL3P19876 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.33□□□□□ -0.44
CXCL3P19876 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.33□□□□□ -0.44
CXCL3P19876 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.33□□□□□ -0.44
CXCL3P19876 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.33□□□□□ -0.44
CXCL3P19876 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.33□□□□□ -0.44
CXCL3P19876 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.33□□□□□ -0.44
CXCL3P19876 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CXCL3P19876 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms