Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.26■□□□□ 0.35
TOP1P11387 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.26■□□□□ 0.35
TOP1P11387 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TOP1P11387 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 DPM3-202ENST00000368399 517 ntBASIC17.26■□□□□ 0.35
TOP1P11387 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 NKAIN1P1-201ENST00000435754 582 ntBASIC17.26■□□□□ 0.35
TOP1P11387 AC012441.2-201ENST00000444843 739 ntBASIC17.26■□□□□ 0.35
TOP1P11387 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.26■□□□□ 0.35
TOP1P11387 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.26■□□□□ 0.35
TOP1P11387 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.26■□□□□ 0.35
TOP1P11387 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TOP1P11387 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.26■□□□□ 0.35
TOP1P11387 AC244452.3-201ENST00000636814 210 ntBASIC17.26■□□□□ 0.35
TOP1P11387 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TOP1P11387 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.26■□□□□ 0.35
TOP1P11387 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TOP1P11387 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.26■□□□□ 0.35
TOP1P11387 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.26■□□□□ 0.35
TOP1P11387 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TOP1P11387 AC007326.2-201ENST00000624224 7579 ntBASIC17.25■□□□□ 0.35
TOP1P11387 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TOP1P11387 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP1P11387 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.25■□□□□ 0.35
TOP1P11387 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TOP1P11387 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TOP1P11387 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TOP1P11387 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.25■□□□□ 0.35
TOP1P11387 AC140479.7-201ENST00000636301 2332 ntBASIC17.25■□□□□ 0.35
TOP1P11387 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP1P11387 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TOP1P11387 CICP14-201ENST00000629111 2732 ntBASIC17.25■□□□□ 0.35
TOP1P11387 AL590440.2-201ENST00000641973 1595 ntBASIC17.25■□□□□ 0.35
TOP1P11387 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.25■□□□□ 0.35
TOP1P11387 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.25■□□□□ 0.35
TOP1P11387 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP1P11387 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TOP1P11387 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.25■□□□□ 0.35
TOP1P11387 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.25■□□□□ 0.35
TOP1P11387 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.25■□□□□ 0.35
TOP1P11387 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TOP1P11387 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.25■□□□□ 0.35
TOP1P11387 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.25■□□□□ 0.35
TOP1P11387 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.25■□□□□ 0.35
TOP1P11387 MIR6720-201ENST00000611664 98 ntBASIC17.25■□□□□ 0.35
TOP1P11387 AC004923.1-202ENST00000642106 209 ntBASIC17.25■□□□□ 0.35
TOP1P11387 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TOP1P11387 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TOP1P11387 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TOP1P11387 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP1P11387 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TOP1P11387 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP1P11387 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP1P11387 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.25■□□□□ 0.35
TOP1P11387 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
TOP1P11387 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP1P11387 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP1P11387 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.24■□□□□ 0.35
TOP1P11387 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.24■□□□□ 0.35
TOP1P11387 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.24■□□□□ 0.35
TOP1P11387 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.24■□□□□ 0.35
TOP1P11387 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 AC004899.1-201ENST00000424687 1714 ntBASIC17.24■□□□□ 0.35
TOP1P11387 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 AL008718.2-201ENST00000609206 1313 ntBASIC17.24■□□□□ 0.35
TOP1P11387 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.24■□□□□ 0.35
TOP1P11387 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.24■□□□□ 0.35
TOP1P11387 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TOP1P11387 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TOP1P11387 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TOP1P11387 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP1P11387 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.24■□□□□ 0.35
TOP1P11387 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms