Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CAPN1P07384 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 AC152010.1-201ENST00000415779 2006 ntBASIC14.55□□□□□ -0.08
CAPN1P07384 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CAPN1P07384 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.55□□□□□ -0.08
CAPN1P07384 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.55□□□□□ -0.08
CAPN1P07384 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.55□□□□□ -0.08
CAPN1P07384 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN1P07384 AC026954.1-201ENST00000429771 1293 ntBASIC14.55□□□□□ -0.08
CAPN1P07384 ACTBP11-201ENST00000436287 1126 ntBASIC14.55□□□□□ -0.08
CAPN1P07384 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CAPN1P07384 AC026434.2-201ENST00000506094 1078 ntBASIC14.55□□□□□ -0.08
CAPN1P07384 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 AC022616.1-201ENST00000518688 554 ntBASIC14.55□□□□□ -0.08
CAPN1P07384 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.55□□□□□ -0.08
CAPN1P07384 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.55□□□□□ -0.08
CAPN1P07384 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN1P07384 AC025279.2-201ENST00000569730 653 ntBASIC14.55□□□□□ -0.08
CAPN1P07384 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN1P07384 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CAPN1P07384 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 AC006504.5-208ENST00000588784 2401 ntBASIC14.55□□□□□ -0.08
CAPN1P07384 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN1P07384 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.55□□□□□ -0.08
CAPN1P07384 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CAPN1P07384 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CAPN1P07384 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 AC136759.1-202ENST00000530858 2194 ntBASIC14.54□□□□□ -0.08
CAPN1P07384 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CAPN1P07384 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CAPN1P07384 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.54□□□□□ -0.08
CAPN1P07384 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN1P07384 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.54□□□□□ -0.08
CAPN1P07384 AC114812.1-204ENST00000449669 728 ntBASIC14.54□□□□□ -0.08
CAPN1P07384 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.54□□□□□ -0.08
CAPN1P07384 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.54□□□□□ -0.08
CAPN1P07384 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.54□□□□□ -0.08
CAPN1P07384 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.54□□□□□ -0.08
CAPN1P07384 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN1P07384 MIR4538-201ENST00000581377 78 ntBASIC14.54□□□□□ -0.08
CAPN1P07384 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN1P07384 RHOXF1P1-202ENST00000635473 501 ntBASIC14.54□□□□□ -0.08
CAPN1P07384 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 TUBB1P2-201ENST00000422712 1306 ntBASIC14.54□□□□□ -0.08
CAPN1P07384 TUBB1P1-201ENST00000503144 1300 ntBASIC14.54□□□□□ -0.08
CAPN1P07384 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN1P07384 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.54□□□□□ -0.08
CAPN1P07384 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN1P07384 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CAPN1P07384 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.54□□□□□ -0.08
CAPN1P07384 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
CAPN1P07384 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN1P07384 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN1P07384 AGGF1P1-201ENST00000509500 2073 ntBASIC14.54□□□□□ -0.08
CAPN1P07384 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CAPN1P07384 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CAPN1P07384 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CAPN1P07384 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.54□□□□□ -0.08
CAPN1P07384 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.54□□□□□ -0.08
CAPN1P07384 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN1P07384 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CAPN1P07384 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CAPN1P07384 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CAPN1P07384 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.53□□□□□ -0.08
CAPN1P07384 AL928921.2-201ENST00000641325 2442 ntBASIC14.53□□□□□ -0.08
CAPN1P07384 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms