Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 PID1-202ENST00000392054 2745 ntTSL 2 BASIC16.54■□□□□ 0.24
TPM3P06753 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TPM3P06753 HAL-202ENST00000538703 2637 ntTSL 2 BASIC16.54■□□□□ 0.24
TPM3P06753 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TPM3P06753 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TPM3P06753 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TPM3P06753 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TPM3P06753 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TPM3P06753 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 MIR574-201ENST00000385209 96 ntBASIC16.54■□□□□ 0.24
TPM3P06753 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.54■□□□□ 0.24
TPM3P06753 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.54■□□□□ 0.24
TPM3P06753 GAPDHP40-201ENST00000505218 1006 ntBASIC16.54■□□□□ 0.24
TPM3P06753 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.54■□□□□ 0.24
TPM3P06753 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
TPM3P06753 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TPM3P06753 MIR3687-2-201ENST00000577708 61 ntBASIC16.54■□□□□ 0.24
TPM3P06753 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.54■□□□□ 0.24
TPM3P06753 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.54■□□□□ 0.24
TPM3P06753 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.54■□□□□ 0.24
TPM3P06753 MIR3687-1-201ENST00000614492 61 ntBASIC16.54■□□□□ 0.24
TPM3P06753 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.54■□□□□ 0.24
TPM3P06753 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.54■□□□□ 0.24
TPM3P06753 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.54■□□□□ 0.24
TPM3P06753 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.54■□□□□ 0.24
TPM3P06753 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TPM3P06753 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.54■□□□□ 0.24
TPM3P06753 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.54■□□□□ 0.24
TPM3P06753 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.54■□□□□ 0.24
TPM3P06753 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC16.54■□□□□ 0.24
TPM3P06753 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC16.54■□□□□ 0.24
TPM3P06753 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TPM3P06753 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TPM3P06753 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.54■□□□□ 0.24
TPM3P06753 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 PCDHA5-203ENST00000614258 4248 ntBASIC16.53■□□□□ 0.24
TPM3P06753 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.53■□□□□ 0.24
TPM3P06753 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TPM3P06753 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.53■□□□□ 0.24
TPM3P06753 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TPM3P06753 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC16.53■□□□□ 0.24
TPM3P06753 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TPM3P06753 KRT8P35-201ENST00000483942 1338 ntBASIC16.53■□□□□ 0.24
TPM3P06753 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.53■□□□□ 0.24
TPM3P06753 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TPM3P06753 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.53■□□□□ 0.24
TPM3P06753 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.53■□□□□ 0.24
TPM3P06753 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 NUS1P3-201ENST00000423502 862 ntBASIC16.53■□□□□ 0.24
TPM3P06753 AL353779.1-201ENST00000434793 351 ntBASIC16.53■□□□□ 0.24
TPM3P06753 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.53■□□□□ 0.24
TPM3P06753 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.53■□□□□ 0.24
TPM3P06753 MYADML-201ENST00000474610 2147 ntBASIC16.53■□□□□ 0.24
TPM3P06753 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.53■□□□□ 0.24
TPM3P06753 AC069262.1-201ENST00000539058 672 ntBASIC16.53■□□□□ 0.24
TPM3P06753 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.53■□□□□ 0.24
TPM3P06753 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.53■□□□□ 0.24
TPM3P06753 SPDYE12P-201ENST00000618416 771 ntBASIC16.53■□□□□ 0.24
TPM3P06753 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
TPM3P06753 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TPM3P06753 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.53■□□□□ 0.24
TPM3P06753 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TPM3P06753 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms