Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.94□□□□□ -0.18
MT-ND1P03886 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
MT-ND1P03886 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.94□□□□□ -0.18
MT-ND1P03886 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
MT-ND1P03886 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.94□□□□□ -0.18
MT-ND1P03886 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.94□□□□□ -0.18
MT-ND1P03886 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.94□□□□□ -0.18
MT-ND1P03886 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
MT-ND1P03886 AC015909.5-201ENST00000624336 2266 ntBASIC13.94□□□□□ -0.18
MT-ND1P03886 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.94□□□□□ -0.18
MT-ND1P03886 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 AC015818.8-201ENST00000587907 1519 ntBASIC13.94□□□□□ -0.18
MT-ND1P03886 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.94□□□□□ -0.18
MT-ND1P03886 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.94□□□□□ -0.18
MT-ND1P03886 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
MT-ND1P03886 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
MT-ND1P03886 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
MT-ND1P03886 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.93□□□□□ -0.18
MT-ND1P03886 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 MYADML-201ENST00000474610 2147 ntBASIC13.93□□□□□ -0.18
MT-ND1P03886 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.93□□□□□ -0.18
MT-ND1P03886 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 TSSK5P-201ENST00000423978 907 ntBASIC13.93□□□□□ -0.18
MT-ND1P03886 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.93□□□□□ -0.18
MT-ND1P03886 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.93□□□□□ -0.18
MT-ND1P03886 AC009477.1-201ENST00000452936 217 ntBASIC13.93□□□□□ -0.18
MT-ND1P03886 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 MEIS3P1-201ENST00000495167 958 ntBASIC13.93□□□□□ -0.18
MT-ND1P03886 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.93□□□□□ -0.18
MT-ND1P03886 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.93□□□□□ -0.18
MT-ND1P03886 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.93□□□□□ -0.18
MT-ND1P03886 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.93□□□□□ -0.18
MT-ND1P03886 AC023511.2-201ENST00000618803 211 ntBASIC13.93□□□□□ -0.18
MT-ND1P03886 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.93□□□□□ -0.18
MT-ND1P03886 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 AC005014.1-201ENST00000432006 2976 ntBASIC13.93□□□□□ -0.18
MT-ND1P03886 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.93□□□□□ -0.18
MT-ND1P03886 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.93□□□□□ -0.18
MT-ND1P03886 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.93□□□□□ -0.18
MT-ND1P03886 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MT-ND1P03886 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.93□□□□□ -0.18
MT-ND1P03886 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.92□□□□□ -0.18
MT-ND1P03886 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 AC093525.8-201ENST00000624099 1342 ntBASIC13.92□□□□□ -0.18
MT-ND1P03886 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
MT-ND1P03886 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.92□□□□□ -0.18
MT-ND1P03886 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.92□□□□□ -0.18
MT-ND1P03886 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
MT-ND1P03886 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
MT-ND1P03886 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.92□□□□□ -0.18
MT-ND1P03886 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.92□□□□□ -0.18
MT-ND1P03886 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.92□□□□□ -0.18
MT-ND1P03886 GAPDHP40-201ENST00000505218 1006 ntBASIC13.92□□□□□ -0.18
MT-ND1P03886 IGHV3-42-201ENST00000520410 361 ntBASIC13.92□□□□□ -0.18
MT-ND1P03886 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
MT-ND1P03886 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
MT-ND1P03886 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.92□□□□□ -0.18
MT-ND1P03886 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
MT-ND1P03886 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.92□□□□□ -0.18
MT-ND1P03886 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.92□□□□□ -0.18
MT-ND1P03886 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms