Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-AP01891 BEND3P3-201ENST00000611030 2440 ntBASIC12.49□□□□□ -0.41
HLA-AP01891 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-AP01891 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 AC090643.2-201ENST00000623442 2029 ntBASIC12.49□□□□□ -0.41
HLA-AP01891 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-AP01891 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.49□□□□□ -0.41
HLA-AP01891 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.49□□□□□ -0.41
HLA-AP01891 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HLA-AP01891 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-AP01891 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HLA-AP01891 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
HLA-AP01891 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-AP01891 AC074338.1-201ENST00000416825 156 ntBASIC12.49□□□□□ -0.41
HLA-AP01891 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.49□□□□□ -0.41
HLA-AP01891 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-AP01891 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.49□□□□□ -0.41
HLA-AP01891 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 KRT18P43-201ENST00000469825 1281 ntBASIC12.49□□□□□ -0.41
HLA-AP01891 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.49□□□□□ -0.41
HLA-AP01891 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
HLA-AP01891 ALG1L8P-201ENST00000533887 760 ntBASIC12.49□□□□□ -0.41
HLA-AP01891 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.49□□□□□ -0.41
HLA-AP01891 RARRES2P9-201ENST00000565168 469 ntBASIC12.49□□□□□ -0.41
HLA-AP01891 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.49□□□□□ -0.41
HLA-AP01891 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.49□□□□□ -0.41
HLA-AP01891 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-AP01891 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-AP01891 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 AC079781.4-201ENST00000641908 219 ntBASIC12.49□□□□□ -0.41
HLA-AP01891 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
HLA-AP01891 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.49□□□□□ -0.41
HLA-AP01891 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-AP01891 PCDHB18P-202ENST00000526308 3197 ntBASIC12.49□□□□□ -0.41
HLA-AP01891 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
HLA-AP01891 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
HLA-AP01891 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-AP01891 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HLA-AP01891 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
HLA-AP01891 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-AP01891 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-AP01891 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-AP01891 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HLA-AP01891 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.48□□□□□ -0.41
HLA-AP01891 SPDYE17-201ENST00000412399 783 ntBASIC12.48□□□□□ -0.41
HLA-AP01891 KRT18P64-201ENST00000434946 1219 ntBASIC12.48□□□□□ -0.41
HLA-AP01891 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-AP01891 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.48□□□□□ -0.41
HLA-AP01891 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.48□□□□□ -0.41
HLA-AP01891 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-AP01891 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-AP01891 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-AP01891 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-AP01891 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-AP01891 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-AP01891 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-AP01891 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HLA-AP01891 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-AP01891 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-AP01891 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms