Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.82□□□□□ -0.04
GPC4O75487 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.82□□□□□ -0.04
GPC4O75487 GNRHR2-203ENST00000581100 1187 ntBASIC14.82□□□□□ -0.04
GPC4O75487 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
GPC4O75487 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
GPC4O75487 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 AC233724.13-201ENST00000598383 410 ntBASIC14.82□□□□□ -0.04
GPC4O75487 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
GPC4O75487 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GPC4O75487 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.81□□□□□ -0.04
GPC4O75487 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.81□□□□□ -0.04
GPC4O75487 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.81□□□□□ -0.04
GPC4O75487 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 AL928921.2-201ENST00000641325 2442 ntBASIC14.81□□□□□ -0.04
GPC4O75487 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GPC4O75487 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
GPC4O75487 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GPC4O75487 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GPC4O75487 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.81□□□□□ -0.04
GPC4O75487 AL355864.2-201ENST00000447420 863 ntBASIC14.81□□□□□ -0.04
GPC4O75487 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.81□□□□□ -0.04
GPC4O75487 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.81□□□□□ -0.04
GPC4O75487 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.81□□□□□ -0.04
GPC4O75487 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GPC4O75487 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.81□□□□□ -0.04
GPC4O75487 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GPC4O75487 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.81□□□□□ -0.04
GPC4O75487 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.81□□□□□ -0.04
GPC4O75487 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
GPC4O75487 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.81□□□□□ -0.04
GPC4O75487 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 AC015802.1-201ENST00000588104 1449 ntBASIC14.81□□□□□ -0.04
GPC4O75487 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 AC010327.5-201ENST00000586923 3061 ntBASIC14.81□□□□□ -0.04
GPC4O75487 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GPC4O75487 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.81□□□□□ -0.04
GPC4O75487 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
GPC4O75487 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 BEND3P1-201ENST00000421591 1944 ntBASIC14.8□□□□□ -0.04
GPC4O75487 AC092053.3-201ENST00000641308 4975 ntBASIC14.8□□□□□ -0.04
GPC4O75487 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
GPC4O75487 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms