Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH4O75427 AL161932.2-201ENST00000435436 679 ntBASIC15.26■□□□□ 0.03
LRCH4O75427 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH4O75427 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.26■□□□□ 0.03
LRCH4O75427 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LRCH4O75427 AC079316.1-201ENST00000548397 411 ntBASIC15.26■□□□□ 0.03
LRCH4O75427 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH4O75427 RAB43P1-201ENST00000561790 589 ntBASIC15.26■□□□□ 0.03
LRCH4O75427 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.26■□□□□ 0.03
LRCH4O75427 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH4O75427 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.26■□□□□ 0.03
LRCH4O75427 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH4O75427 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH4O75427 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH4O75427 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH4O75427 E2F3P2-201ENST00000447755 1422 ntBASIC15.26■□□□□ 0.03
LRCH4O75427 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.26■□□□□ 0.03
LRCH4O75427 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRCH4O75427 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LRCH4O75427 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
LRCH4O75427 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRCH4O75427 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH4O75427 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
LRCH4O75427 OR2I1P-209ENST00000641730 5365 ntBASIC15.25■□□□□ 0.03
LRCH4O75427 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
LRCH4O75427 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
LRCH4O75427 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH4O75427 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LRCH4O75427 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.25■□□□□ 0.03
LRCH4O75427 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.25■□□□□ 0.03
LRCH4O75427 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH4O75427 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.25■□□□□ 0.03
LRCH4O75427 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LRCH4O75427 AC023310.1-201ENST00000554836 735 ntBASIC15.25■□□□□ 0.03
LRCH4O75427 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.25■□□□□ 0.03
LRCH4O75427 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.25■□□□□ 0.03
LRCH4O75427 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LRCH4O75427 AC132192.2-201ENST00000596206 1147 ntBASIC15.25■□□□□ 0.03
LRCH4O75427 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH4O75427 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.25■□□□□ 0.03
LRCH4O75427 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LRCH4O75427 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LRCH4O75427 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LRCH4O75427 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH4O75427 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.25■□□□□ 0.03
LRCH4O75427 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.24■□□□□ 0.03
LRCH4O75427 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRCH4O75427 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRCH4O75427 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 AL023775.1-201ENST00000454907 1746 ntBASIC15.24■□□□□ 0.03
LRCH4O75427 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.24■□□□□ 0.03
LRCH4O75427 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
LRCH4O75427 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.24■□□□□ 0.03
LRCH4O75427 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.24■□□□□ 0.03
LRCH4O75427 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRCH4O75427 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.24■□□□□ 0.03
LRCH4O75427 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms