Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.04□□□□□ -0.64
SH2D1AO60880 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.04□□□□□ -0.64
SH2D1AO60880 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.04□□□□□ -0.64
SH2D1AO60880 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SH2D1AO60880 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.04□□□□□ -0.64
SH2D1AO60880 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC11.04□□□□□ -0.64
SH2D1AO60880 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SH2D1AO60880 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SH2D1AO60880 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 AC020658.7-201ENST00000624274 2442 ntBASIC11.04□□□□□ -0.64
SH2D1AO60880 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SH2D1AO60880 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.04□□□□□ -0.64
SH2D1AO60880 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SH2D1AO60880 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
SH2D1AO60880 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
SH2D1AO60880 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.03□□□□□ -0.64
SH2D1AO60880 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.03□□□□□ -0.64
SH2D1AO60880 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.03□□□□□ -0.64
SH2D1AO60880 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.03□□□□□ -0.64
SH2D1AO60880 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC11.03□□□□□ -0.64
SH2D1AO60880 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SH2D1AO60880 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SH2D1AO60880 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.03□□□□□ -0.64
SH2D1AO60880 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.03□□□□□ -0.64
SH2D1AO60880 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SH2D1AO60880 TLE1P1-201ENST00000422965 589 ntBASIC11.03□□□□□ -0.64
SH2D1AO60880 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.03□□□□□ -0.64
SH2D1AO60880 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.03□□□□□ -0.64
SH2D1AO60880 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.03□□□□□ -0.64
SH2D1AO60880 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.03□□□□□ -0.64
SH2D1AO60880 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.03□□□□□ -0.64
SH2D1AO60880 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.03□□□□□ -0.64
SH2D1AO60880 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.03□□□□□ -0.64
SH2D1AO60880 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.03□□□□□ -0.64
SH2D1AO60880 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.03□□□□□ -0.64
SH2D1AO60880 AL049840.4-201ENST00000602422 811 ntBASIC11.03□□□□□ -0.64
SH2D1AO60880 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.03□□□□□ -0.64
SH2D1AO60880 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.03□□□□□ -0.64
SH2D1AO60880 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
SH2D1AO60880 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SH2D1AO60880 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.03□□□□□ -0.64
SH2D1AO60880 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SH2D1AO60880 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.03□□□□□ -0.64
SH2D1AO60880 AC087499.5-201ENST00000452760 1342 ntBASIC11.03□□□□□ -0.64
SH2D1AO60880 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 KRT8P35-201ENST00000483942 1338 ntBASIC11.03□□□□□ -0.64
SH2D1AO60880 MRPL37P1-201ENST00000592451 1337 ntBASIC11.03□□□□□ -0.64
SH2D1AO60880 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.03□□□□□ -0.64
SH2D1AO60880 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
SH2D1AO60880 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SH2D1AO60880 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SH2D1AO60880 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SH2D1AO60880 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms