Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 CHCHD2P9-201ENST00000461726 456 ntBASIC18.05■□□□□ 0.48
CACNA1FO60840 GOLGA2P8-201ENST00000505201 779 ntBASIC18.05■□□□□ 0.48
CACNA1FO60840 SLC25A15P3-201ENST00000505530 290 ntBASIC18.05■□□□□ 0.48
CACNA1FO60840 RNA5SP423-201ENST00000517127 109 ntBASIC18.05■□□□□ 0.48
CACNA1FO60840 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.05■□□□□ 0.48
CACNA1FO60840 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.05■□□□□ 0.48
CACNA1FO60840 AL132994.1-201ENST00000554098 400 ntBASIC18.05■□□□□ 0.48
CACNA1FO60840 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.05■□□□□ 0.48
CACNA1FO60840 KRT18P8-201ENST00000581937 1246 ntBASIC18.05■□□□□ 0.48
CACNA1FO60840 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.05■□□□□ 0.48
CACNA1FO60840 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC18.05■□□□□ 0.48
CACNA1FO60840 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CACNA1FO60840 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CACNA1FO60840 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 RPL13AP3-202ENST00000494676 1473 ntBASIC18.05■□□□□ 0.48
CACNA1FO60840 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CACNA1FO60840 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1FO60840 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC18.04■□□□□ 0.48
CACNA1FO60840 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.04■□□□□ 0.48
CACNA1FO60840 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CACNA1FO60840 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CACNA1FO60840 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC18.04■□□□□ 0.48
CACNA1FO60840 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC18.04■□□□□ 0.48
CACNA1FO60840 AL139424.3-202ENST00000641619 917 ntBASIC18.04■□□□□ 0.48
CACNA1FO60840 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC18.04■□□□□ 0.48
CACNA1FO60840 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC18.04■□□□□ 0.48
CACNA1FO60840 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CACNA1FO60840 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC18.04■□□□□ 0.48
CACNA1FO60840 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CACNA1FO60840 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC18.04■□□□□ 0.48
CACNA1FO60840 AC098934.1-203ENST00000442868 1262 ntBASIC18.04■□□□□ 0.48
CACNA1FO60840 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.04■□□□□ 0.48
CACNA1FO60840 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.04■□□□□ 0.48
CACNA1FO60840 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CACNA1FO60840 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.04■□□□□ 0.48
CACNA1FO60840 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1FO60840 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1FO60840 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1FO60840 TEKT4P2-202ENST00000559466 1312 ntBASIC18.03■□□□□ 0.48
CACNA1FO60840 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC18.03■□□□□ 0.48
CACNA1FO60840 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1FO60840 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1FO60840 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CACNA1FO60840 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.03■□□□□ 0.48
CACNA1FO60840 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1FO60840 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1FO60840 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.03■□□□□ 0.48
CACNA1FO60840 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.03■□□□□ 0.48
CACNA1FO60840 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.03■□□□□ 0.48
CACNA1FO60840 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CACNA1FO60840 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1FO60840 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC18.03■□□□□ 0.48
CACNA1FO60840 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1FO60840 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1FO60840 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1FO60840 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CACNA1FO60840 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC18.03■□□□□ 0.48
CACNA1FO60840 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CACNA1FO60840 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.03■□□□□ 0.48
CACNA1FO60840 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC18.03■□□□□ 0.48
CACNA1FO60840 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1FO60840 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1FO60840 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1FO60840 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CACNA1FO60840 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CACNA1FO60840 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CACNA1FO60840 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CACNA1FO60840 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CACNA1FO60840 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.02■□□□□ 0.48
CACNA1FO60840 RN7SL788P-201ENST00000460504 316 ntBASIC18.02■□□□□ 0.48
CACNA1FO60840 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC18.02■□□□□ 0.48
CACNA1FO60840 SIGLEC18P-201ENST00000602271 909 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms