Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CTNND1O60716 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.05■□□□□ 0.32
CTNND1O60716 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CTNND1O60716 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNND1O60716 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CTNND1O60716 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNND1O60716 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNND1O60716 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CTNND1O60716 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.05■□□□□ 0.32
CTNND1O60716 RPL18AP3-201ENST00000462885 528 ntBASIC17.05■□□□□ 0.32
CTNND1O60716 CTBP2P4-201ENST00000513884 920 ntBASIC17.05■□□□□ 0.32
CTNND1O60716 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.05■□□□□ 0.32
CTNND1O60716 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNND1O60716 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNND1O60716 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CTNND1O60716 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.05■□□□□ 0.32
CTNND1O60716 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CTNND1O60716 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNND1O60716 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNND1O60716 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.05■□□□□ 0.32
CTNND1O60716 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.05■□□□□ 0.32
CTNND1O60716 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 AC138035.3-201ENST00000622706 2791 ntBASIC17.05■□□□□ 0.32
CTNND1O60716 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CTNND1O60716 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNND1O60716 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.04■□□□□ 0.32
CTNND1O60716 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.04■□□□□ 0.32
CTNND1O60716 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.04■□□□□ 0.32
CTNND1O60716 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.04■□□□□ 0.32
CTNND1O60716 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.04■□□□□ 0.32
CTNND1O60716 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 KRT17P5-201ENST00000332088 839 ntBASIC17.04■□□□□ 0.32
CTNND1O60716 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.04■□□□□ 0.32
CTNND1O60716 AC114501.1-201ENST00000445949 172 ntBASIC17.04■□□□□ 0.32
CTNND1O60716 ORAOV1P1-201ENST00000503108 395 ntBASIC17.04■□□□□ 0.32
CTNND1O60716 MRPL22P1-201ENST00000505398 616 ntBASIC17.04■□□□□ 0.32
CTNND1O60716 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.04■□□□□ 0.32
CTNND1O60716 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.04■□□□□ 0.32
CTNND1O60716 AC025262.2-201ENST00000623975 1056 ntBASIC17.04■□□□□ 0.32
CTNND1O60716 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.04■□□□□ 0.32
CTNND1O60716 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CTNND1O60716 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CTNND1O60716 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNND1O60716 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.04■□□□□ 0.32
CTNND1O60716 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CTNND1O60716 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.04■□□□□ 0.32
CTNND1O60716 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.04■□□□□ 0.32
CTNND1O60716 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CTNND1O60716 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CTNND1O60716 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 AP002353.1-201ENST00000528257 1599 ntBASIC17.03■□□□□ 0.32
CTNND1O60716 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.03■□□□□ 0.32
CTNND1O60716 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms