Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.83□□□□□ -0.04
KDELR3O43731 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
KDELR3O43731 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.83□□□□□ -0.04
KDELR3O43731 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.83□□□□□ -0.04
KDELR3O43731 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
KDELR3O43731 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
KDELR3O43731 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 AC138028.6-201ENST00000616106 1482 ntBASIC14.82□□□□□ -0.04
KDELR3O43731 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 AC015656.1-201ENST00000624209 3578 ntBASIC14.82□□□□□ -0.04
KDELR3O43731 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.82□□□□□ -0.04
KDELR3O43731 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 AC016700.1-201ENST00000429424 312 ntBASIC14.82□□□□□ -0.04
KDELR3O43731 AC078875.1-201ENST00000431907 724 ntBASIC14.82□□□□□ -0.04
KDELR3O43731 XBP1P1-201ENST00000436573 652 ntBASIC14.82□□□□□ -0.04
KDELR3O43731 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.82□□□□□ -0.04
KDELR3O43731 BX284668.4-201ENST00000453917 508 ntBASIC14.82□□□□□ -0.04
KDELR3O43731 AKR7A2P1-201ENST00000460134 915 ntBASIC14.82□□□□□ -0.04
KDELR3O43731 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.82□□□□□ -0.04
KDELR3O43731 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.82□□□□□ -0.04
KDELR3O43731 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.82□□□□□ -0.04
KDELR3O43731 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.82□□□□□ -0.04
KDELR3O43731 AC104506.1-201ENST00000609247 429 ntBASIC14.82□□□□□ -0.04
KDELR3O43731 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
KDELR3O43731 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 AHCYP4-201ENST00000419201 1315 ntBASIC14.82□□□□□ -0.04
KDELR3O43731 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDELR3O43731 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.82□□□□□ -0.04
KDELR3O43731 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.82□□□□□ -0.04
KDELR3O43731 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
KDELR3O43731 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KDELR3O43731 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KDELR3O43731 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
KDELR3O43731 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.81□□□□□ -0.04
KDELR3O43731 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KDELR3O43731 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
KDELR3O43731 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
KDELR3O43731 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.81□□□□□ -0.04
KDELR3O43731 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KDELR3O43731 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
KDELR3O43731 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.81□□□□□ -0.04
KDELR3O43731 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
KDELR3O43731 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KDELR3O43731 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.81□□□□□ -0.04
KDELR3O43731 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.81□□□□□ -0.04
KDELR3O43731 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.81□□□□□ -0.04
KDELR3O43731 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.81□□□□□ -0.04
KDELR3O43731 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms