Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.82□□□□□ -0.52
UPK2O00526 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
UPK2O00526 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UPK2O00526 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UPK2O00526 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.81□□□□□ -0.52
UPK2O00526 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.81□□□□□ -0.52
UPK2O00526 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
UPK2O00526 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
UPK2O00526 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
UPK2O00526 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.81□□□□□ -0.52
UPK2O00526 MSTO2P-201ENST00000314835 1709 ntBASIC11.81□□□□□ -0.52
UPK2O00526 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.81□□□□□ -0.52
UPK2O00526 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
UPK2O00526 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.81□□□□□ -0.52
UPK2O00526 AL590440.2-201ENST00000641973 1595 ntBASIC11.81□□□□□ -0.52
UPK2O00526 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
UPK2O00526 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
UPK2O00526 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
UPK2O00526 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 ACTG1P3-201ENST00000431775 1114 ntBASIC11.81□□□□□ -0.52
UPK2O00526 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.81□□□□□ -0.52
UPK2O00526 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.81□□□□□ -0.52
UPK2O00526 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.81□□□□□ -0.52
UPK2O00526 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.81□□□□□ -0.52
UPK2O00526 RN7SL204P-201ENST00000582831 262 ntBASIC11.81□□□□□ -0.52
UPK2O00526 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.81□□□□□ -0.52
UPK2O00526 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC11.81□□□□□ -0.52
UPK2O00526 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.81□□□□□ -0.52
UPK2O00526 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.81□□□□□ -0.52
UPK2O00526 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.81□□□□□ -0.52
UPK2O00526 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
UPK2O00526 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.81□□□□□ -0.52
UPK2O00526 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
UPK2O00526 AL031595.1-201ENST00000623969 4709 ntBASIC11.81□□□□□ -0.52
UPK2O00526 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UPK2O00526 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.81□□□□□ -0.52
UPK2O00526 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.81□□□□□ -0.52
UPK2O00526 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
UPK2O00526 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
UPK2O00526 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 AP000593.2-201ENST00000542775 1433 ntBASIC11.8□□□□□ -0.52
UPK2O00526 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.8□□□□□ -0.52
UPK2O00526 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC11.8□□□□□ -0.52
UPK2O00526 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
UPK2O00526 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 TPM3P8-201ENST00000330554 643 ntBASIC11.8□□□□□ -0.52
UPK2O00526 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
UPK2O00526 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.8□□□□□ -0.52
UPK2O00526 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.8□□□□□ -0.52
UPK2O00526 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.8□□□□□ -0.52
UPK2O00526 PUDPP3-201ENST00000445368 636 ntBASIC11.8□□□□□ -0.52
UPK2O00526 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.8□□□□□ -0.52
UPK2O00526 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC11.8□□□□□ -0.52
UPK2O00526 AL391280.1-201ENST00000506969 1062 ntBASIC11.8□□□□□ -0.52
UPK2O00526 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.8□□□□□ -0.52
UPK2O00526 TP53TG3HP-202ENST00000569755 579 ntBASIC11.8□□□□□ -0.52
UPK2O00526 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC11.8□□□□□ -0.52
UPK2O00526 AC027796.2-201ENST00000575326 344 ntBASIC11.8□□□□□ -0.52
UPK2O00526 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 MVK-217ENST00000639206 367 ntTSL 5 BASIC11.8□□□□□ -0.52
UPK2O00526 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms