Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FES-203ENST00000394302 2133 ntTSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 MSANTD4-201ENST00000301919 4087 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 SIN3A-208ENST00000567289 4078 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 WDR6-220ENST00000608424 4070 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 GOLGA2P9-201ENST00000596977 1937 ntBASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 ARMC10P1-201ENST00000313754 855 ntBASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 AL020989.1-201ENST00000422979 469 ntBASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 DENND3-207ENST00000518347 850 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 AC087641.1-201ENST00000557561 1021 ntBASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 C2orf69P3-201ENST00000565542 1120 ntBASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 WT1-AS_3.1-201ENST00000613262 234 ntBASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 CETP-203ENST00000566128 1733 ntTSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 MAST4-201ENST00000261569 7664 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 RPRD2-202ENST00000369068 4612 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 AC018529.2-202ENST00000611482 3087 ntBASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 TNKS-213ENST00000522110 2900 ntBASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 AC023794.5-201ENST00000564380 2157 ntBASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 AC125634.1-201ENST00000438758 1403 ntBASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms