Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 AL590440.2-201ENST00000641973 1595 ntBASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 AC112492.5-201ENST00000421897 457 ntBASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 RHOXF1P1-202ENST00000635473 501 ntBASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC162PA2VCL2 AC090505.1-201ENST00000430515 1834 ntBASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 AHCYP2-201ENST00000430630 1300 ntBASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 BEND3P1-201ENST00000421591 1944 ntBASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 AC005034.1-201ENST00000426657 489 ntBASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 U91328.1-201ENST00000437528 223 ntBASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 AC106886.1-201ENST00000568660 600 ntBASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 AL512343.1-201ENST00000605837 169 ntBASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 AL162274.1-201ENST00000617191 1098 ntBASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC162PA2VCL2 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms