Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC78A2IDD5 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 AL138725.1-201ENST00000407347 1314 ntBASIC14.96□□□□□ -0.01
CCDC78A2IDD5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 AC015688.4-201ENST00000580780 1647 ntBASIC14.96□□□□□ -0.01
CCDC78A2IDD5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 NME2P1-201ENST00000426182 414 ntBASIC14.96□□□□□ -0.01
CCDC78A2IDD5 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 TPT1P11-201ENST00000458482 498 ntBASIC14.96□□□□□ -0.01
CCDC78A2IDD5 FTH1P14-201ENST00000482930 551 ntBASIC14.96□□□□□ -0.01
CCDC78A2IDD5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CCDC78A2IDD5 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CCDC78A2IDD5 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC78A2IDD5 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC78A2IDD5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC78A2IDD5 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC78A2IDD5 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.96□□□□□ -0.02
CCDC78A2IDD5 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.96□□□□□ -0.02
CCDC78A2IDD5 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC78A2IDD5 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC78A2IDD5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 AC006504.5-208ENST00000588784 2401 ntBASIC14.95□□□□□ -0.02
CCDC78A2IDD5 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 TPM3P8-201ENST00000330554 643 ntBASIC14.95□□□□□ -0.02
CCDC78A2IDD5 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 COX5BP8-201ENST00000416911 349 ntBASIC14.95□□□□□ -0.02
CCDC78A2IDD5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 AC138466.3-201ENST00000619983 221 ntBASIC14.95□□□□□ -0.02
CCDC78A2IDD5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC78A2IDD5 AL603764.1-201ENST00000636452 321 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms