Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 MESTP1-201ENST00000404287 994 ntBASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 HCG4-201ENST00000418983 998 ntBASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AC142086.2-201ENST00000569753 217 ntBASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AC010331.1-201ENST00000611423 582 ntBASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AC011767.1-201ENST00000617410 1153 ntBASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AL445647.1-201ENST00000606221 3599 ntBASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 NCF1C-201ENST00000438382 1427 ntBASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AC125634.1-201ENST00000438758 1403 ntBASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AC133065.6-201ENST00000625054 2378 ntBASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 MYADML-201ENST00000474610 2147 ntBASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 MYL9-201ENST00000279022 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AC092802.1-201ENST00000421762 2447 ntTSL 2 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 GPR17-206ENST00000544369 2598 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 CFAP43-204ENST00000369720 2876 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 ZBTB45P1-201ENST00000452761 1456 ntBASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 TP53-208ENST00000504290 2331 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LINC01558Q9Y6Z2 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 HERC6-203ENST00000380265 3781 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 PDE9A-207ENST00000398224 1671 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 PDE9A-210ENST00000398229 1684 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
LINC01558Q9Y6Z2 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms