Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 FNTAP2-201ENST00000430308 634 ntBASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 MTX1P1-201ENST00000440904 838 ntBASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 AL035414.1-201ENST00000451327 857 ntBASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 UPF3AP2-201ENST00000457924 1132 ntBASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 MYADML-201ENST00000474610 2147 ntBASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 RPSAP36-202ENST00000494591 1261 ntBASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 DUX4L46-201ENST00000566845 751 ntBASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 MIR5572-201ENST00000583188 137 ntBASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 KHSRPP1-201ENST00000427983 1768 ntBASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI2Q9Y5P3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAI2Q9Y5P3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms