Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 ACKR1-201ENST00000368121 1240 ntBASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 DGCR5-201ENST00000399539 862 ntBASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 AL162726.2-201ENST00000438986 1017 ntBASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 TP53TG3HP-202ENST00000569755 579 ntBASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 AL033527.5-201ENST00000641382 801 ntBASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RHBDD3Q9Y3P4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 EIF3FP3-201ENST00000434851 1086 ntBASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 AC093433.1-201ENST00000458048 571 ntBASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 GIMAP3P-201ENST00000495150 836 ntBASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 KRT18P25-201ENST00000508931 1278 ntBASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RHBDD3Q9Y3P4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 AC089987.1-201ENST00000551654 2209 ntBASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms