Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 Z69890.1-201ENST00000382990 339 ntBASIC14.18□□□□□ -0.14
LHX6Q9UPM6 ATP5F1P6-201ENST00000402768 767 ntBASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 POM121L8P-201ENST00000417732 1281 ntBASIC14.18□□□□□ -0.14
LHX6Q9UPM6 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 POM121L9P-203ENST00000441984 1285 ntBASIC14.18□□□□□ -0.14
LHX6Q9UPM6 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC015818.2-201ENST00000563569 840 ntBASIC14.18□□□□□ -0.14
LHX6Q9UPM6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC090164.2-201ENST00000611487 516 ntBASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC122108.2-201ENST00000611946 526 ntBASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC091046.2-201ENST00000620775 665 ntBASIC14.18□□□□□ -0.14
LHX6Q9UPM6 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 LINC00431-202ENST00000636375 159 ntBASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 AC068587.8-201ENST00000641239 219 ntBASIC14.18□□□□□ -0.14
LHX6Q9UPM6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LHX6Q9UPM6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 CYP2T1P-202ENST00000641596 2535 ntBASIC14.17□□□□□ -0.14
LHX6Q9UPM6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 AC022188.1-201ENST00000620960 1664 ntBASIC14.17□□□□□ -0.14
LHX6Q9UPM6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 RNU1-114P-201ENST00000365297 166 ntBASIC14.17□□□□□ -0.14
LHX6Q9UPM6 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.17□□□□□ -0.14
LHX6Q9UPM6 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 AP000949.1-201ENST00000438328 629 ntBASIC14.17□□□□□ -0.14
LHX6Q9UPM6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 PUDPP3-201ENST00000445368 636 ntBASIC14.17□□□□□ -0.14
LHX6Q9UPM6 AC114812.1-204ENST00000449669 728 ntBASIC14.17□□□□□ -0.14
LHX6Q9UPM6 AC069277.2-201ENST00000454211 432 ntBASIC14.17□□□□□ -0.14
LHX6Q9UPM6 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 POU5F1P2-201ENST00000521750 823 ntBASIC14.17□□□□□ -0.14
LHX6Q9UPM6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 AC073413.1-201ENST00000603927 732 ntBASIC14.17□□□□□ -0.14
LHX6Q9UPM6 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms