Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 TPI1P2-201ENST00000491343 752 ntBASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 CARS-216ENST00000639317 135 ntTSL 5 BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RIMBP3Q9UFD9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 AC011676.5-201ENST00000624864 2660 ntBASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 NDUFB2P1-201ENST00000506966 295 ntBASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 MED11-203ENST00000575284 652 ntTSL 3 BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 AC068134.4-201ENST00000613365 122 ntBASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RIMBP3Q9UFD9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 RN7SL646P-201ENST00000492969 297 ntBASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 AC114812.4-201ENST00000506676 757 ntBASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 AC010442.2-201ENST00000509301 407 ntBASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 HAX1-211ENST00000532105 771 ntTSL 3 BASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 AC103810.4-201ENST00000578601 257 ntBASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 HNRNPA1P11-201ENST00000580106 956 ntBASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 CALM3-206ENST00000594523 540 ntTSL 4 BASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 AC136475.9-201ENST00000605240 497 ntBASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 PTMAP5-202ENST00000607242 1162 ntBASIC22.14■■□□□ 1.14
RIMBP3Q9UFD9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RIMBP3Q9UFD9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RIMBP3Q9UFD9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC22.14■■□□□ 1.13
RIMBP3Q9UFD9 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RIMBP3Q9UFD9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.14■■□□□ 1.13
RIMBP3Q9UFD9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RIMBP3Q9UFD9 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RIMBP3Q9UFD9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RIMBP3Q9UFD9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RIMBP3Q9UFD9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RIMBP3Q9UFD9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC22.14■■□□□ 1.13
RIMBP3Q9UFD9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RIMBP3Q9UFD9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 AL161932.2-201ENST00000435436 679 ntBASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 LDHAL6CP-201ENST00000502352 1142 ntBASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 RN7SL322P-201ENST00000583519 299 ntBASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 AC073592.10-201ENST00000624789 597 ntBASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 AC026271.1-201ENST00000447794 1348 ntBASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC22.13■■□□□ 1.13
RIMBP3Q9UFD9 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms