Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC233724.13-201ENST00000598383 410 ntBASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 MST1P2-201ENST00000457982 2291 ntBASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
VPS29Q9UBQ0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 AL512384.1-201ENST00000406683 331 ntBASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 AC004945.1-201ENST00000416738 983 ntBASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 AC016694.1-201ENST00000434179 700 ntBASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 TTTY23B-201ENST00000442790 549 ntBASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 AL596325.1-201ENST00000563991 1082 ntBASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 BTNL10-201ENST00000595971 695 ntBASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 AC008735.3-201ENST00000596646 500 ntBASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 OR10B1P-201ENST00000601666 907 ntBASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 AL358472.5-202ENST00000641448 1267 ntBASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 AC011474.4-201ENST00000623523 2076 ntBASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
VPS29Q9UBQ0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS29Q9UBQ0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms