Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AL662890.1-201ENST00000396818 632 ntBASIC14.7□□□□□ -0.06
SPASTQ9UBP0 AL008707.1-201ENST00000422498 534 ntBASIC14.7□□□□□ -0.06
SPASTQ9UBP0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 AC106794.1-201ENST00000506935 792 ntBASIC14.7□□□□□ -0.06
SPASTQ9UBP0 AC044849.1-201ENST00000519737 1188 ntBASIC14.7□□□□□ -0.06
SPASTQ9UBP0 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 MIR4683-201ENST00000579659 81 ntBASIC14.7□□□□□ -0.06
SPASTQ9UBP0 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 MIR769-201ENST00000390225 118 ntBASIC14.69□□□□□ -0.06
SPASTQ9UBP0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 NKAIN1P1-201ENST00000435754 582 ntBASIC14.69□□□□□ -0.06
SPASTQ9UBP0 TUBB8P8-201ENST00000458717 1058 ntBASIC14.69□□□□□ -0.06
SPASTQ9UBP0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 AC138696.2-201ENST00000607376 223 ntBASIC14.69□□□□□ -0.06
SPASTQ9UBP0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SPASTQ9UBP0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.68□□□□□ -0.06
SPASTQ9UBP0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms