Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 AC138466.3-201ENST00000619983 221 ntBASIC14.51□□□□□ -0.09
MKS1Q9NXB0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.51□□□□□ -0.09
MKS1Q9NXB0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AL356585.2-201ENST00000625078 2396 ntBASIC14.5□□□□□ -0.09
MKS1Q9NXB0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AL391647.1-201ENST00000395664 511 ntBASIC14.5□□□□□ -0.09
MKS1Q9NXB0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AC055876.3-201ENST00000431496 288 ntBASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AC022137.2-201ENST00000503482 481 ntBASIC14.5□□□□□ -0.09
MKS1Q9NXB0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AC138649.4-201ENST00000612222 287 ntBASIC14.5□□□□□ -0.09
MKS1Q9NXB0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AC079781.4-201ENST00000641908 219 ntBASIC14.5□□□□□ -0.09
MKS1Q9NXB0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 AC020910.5-201ENST00000623668 1865 ntBASIC14.5□□□□□ -0.09
MKS1Q9NXB0 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.5□□□□□ -0.09
MKS1Q9NXB0 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.5□□□□□ -0.09
MKS1Q9NXB0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 AP000593.2-201ENST00000542775 1433 ntBASIC14.49□□□□□ -0.09
MKS1Q9NXB0 AC009093.10-201ENST00000641956 1442 ntBASIC14.49□□□□□ -0.09
MKS1Q9NXB0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 ENPP7P5-201ENST00000541031 1031 ntBASIC14.49□□□□□ -0.09
MKS1Q9NXB0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 AP001063.1-201ENST00000568332 529 ntBASIC14.49□□□□□ -0.09
MKS1Q9NXB0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MKS1Q9NXB0 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms