Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 RN7SL832P-201ENST00000607781 1756 ntBASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 AC087499.6-201ENST00000411576 835 ntBASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 AC026434.2-201ENST00000506094 1078 ntBASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 AC023310.3-201ENST00000557027 670 ntBASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 AC100756.1-201ENST00000562736 682 ntBASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 AC138749.3-201ENST00000567691 622 ntBASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 AC116165.1-201ENST00000611806 668 ntBASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 AC114271.1-201ENST00000612689 2813 ntBASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 TP53TG3HP-202ENST00000569755 579 ntBASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 AC140912.1-201ENST00000577171 1054 ntBASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms