Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 AL359711.2-201ENST00000563105 872 ntBASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 AC233724.13-201ENST00000598383 410 ntBASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 AL049840.4-201ENST00000602422 811 ntBASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 SALL4P5-201ENST00000419001 1760 ntBASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FOXP3Q9BZS1 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 MRPL37P1-201ENST00000592451 1337 ntBASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 AC087386.2-201ENST00000623212 4637 ntBASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 BOLA2P3-201ENST00000404566 256 ntBASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 AL442647.2-201ENST00000429864 857 ntBASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 AL162726.2-201ENST00000438986 1017 ntBASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 TDH-203ENST00000531764 1110 ntBASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 AC012617.1-204ENST00000586340 2305 ntBASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms