Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SEC22CQ9BRL7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SEC22CQ9BRL7 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC22CQ9BRL7 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 AC005014.1-201ENST00000432006 2976 ntBASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 AC098831.1-202ENST00000438821 336 ntBASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 FAM197Y8-203ENST00000450145 560 ntBASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC22CQ9BRL7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 TNRC18P1-201ENST00000502875 3650 ntBASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 AKAP8P1-201ENST00000434743 1349 ntBASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms