Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF2Q99496 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF2Q99496 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.83□□□□□ -0.52
RNF2Q99496 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.83□□□□□ -0.52
RNF2Q99496 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.83□□□□□ -0.52
RNF2Q99496 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.83□□□□□ -0.52
RNF2Q99496 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF2Q99496 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF2Q99496 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF2Q99496 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF2Q99496 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.82□□□□□ -0.52
RNF2Q99496 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.82□□□□□ -0.52
RNF2Q99496 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.82□□□□□ -0.52
RNF2Q99496 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RNF2Q99496 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
RNF2Q99496 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RNF2Q99496 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RNF2Q99496 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.82□□□□□ -0.52
RNF2Q99496 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RNF2Q99496 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RNF2Q99496 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.82□□□□□ -0.52
RNF2Q99496 UGT1A2P-201ENST00000454886 866 ntBASIC11.82□□□□□ -0.52
RNF2Q99496 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.82□□□□□ -0.52
RNF2Q99496 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.82□□□□□ -0.52
RNF2Q99496 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.82□□□□□ -0.52
RNF2Q99496 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.82□□□□□ -0.52
RNF2Q99496 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.82□□□□□ -0.52
RNF2Q99496 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.82□□□□□ -0.52
RNF2Q99496 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.82□□□□□ -0.52
RNF2Q99496 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
RNF2Q99496 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.82□□□□□ -0.52
RNF2Q99496 PCDHA5-203ENST00000614258 4248 ntBASIC11.82□□□□□ -0.52
RNF2Q99496 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.82□□□□□ -0.52
RNF2Q99496 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.82□□□□□ -0.52
RNF2Q99496 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RNF2Q99496 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.82□□□□□ -0.52
RNF2Q99496 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RNF2Q99496 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 AC089987.1-201ENST00000551654 2209 ntBASIC11.82□□□□□ -0.52
RNF2Q99496 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.82□□□□□ -0.52
RNF2Q99496 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF2Q99496 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.81□□□□□ -0.52
RNF2Q99496 AC023090.2-201ENST00000625182 2110 ntBASIC11.81□□□□□ -0.52
RNF2Q99496 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.81□□□□□ -0.52
RNF2Q99496 AL354702.1-201ENST00000442006 1960 ntBASIC11.81□□□□□ -0.52
RNF2Q99496 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.81□□□□□ -0.52
RNF2Q99496 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.81□□□□□ -0.52
RNF2Q99496 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.81□□□□□ -0.52
RNF2Q99496 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 TCAM1P-207ENST00000485295 1537 ntBASIC11.81□□□□□ -0.52
RNF2Q99496 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RNF2Q99496 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.81□□□□□ -0.52
RNF2Q99496 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.81□□□□□ -0.52
RNF2Q99496 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.81□□□□□ -0.52
RNF2Q99496 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
RNF2Q99496 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RNF2Q99496 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RNF2Q99496 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms