Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.54□□□□□ -0.4
USP9XQ93008 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
USP9XQ93008 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.54□□□□□ -0.4
USP9XQ93008 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
USP9XQ93008 BMF-206ENST00000558774 671 ntTSL 3 BASIC12.54□□□□□ -0.4
USP9XQ93008 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.54□□□□□ -0.4
USP9XQ93008 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC12.54□□□□□ -0.4
USP9XQ93008 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC12.54□□□□□ -0.4
USP9XQ93008 RARS-210ENST00000626454 177 ntTSL 5 BASIC12.54□□□□□ -0.4
USP9XQ93008 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.54□□□□□ -0.4
USP9XQ93008 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
USP9XQ93008 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.54□□□□□ -0.4
USP9XQ93008 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.54□□□□□ -0.4
USP9XQ93008 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
USP9XQ93008 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.54□□□□□ -0.4
USP9XQ93008 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
USP9XQ93008 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
USP9XQ93008 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
USP9XQ93008 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
USP9XQ93008 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 GGTLC4P-201ENST00000402176 664 ntBASIC12.53□□□□□ -0.4
USP9XQ93008 AL080243.1-201ENST00000423293 1060 ntBASIC12.53□□□□□ -0.4
USP9XQ93008 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.53□□□□□ -0.4
USP9XQ93008 GALP-202ENST00000440823 889 ntTSL 5 BASIC12.53□□□□□ -0.4
USP9XQ93008 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC12.53□□□□□ -0.4
USP9XQ93008 KLF17P1-201ENST00000547105 1126 ntBASIC12.53□□□□□ -0.4
USP9XQ93008 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC12.53□□□□□ -0.4
USP9XQ93008 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC12.53□□□□□ -0.4
USP9XQ93008 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC12.53□□□□□ -0.4
USP9XQ93008 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC12.53□□□□□ -0.4
USP9XQ93008 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.53□□□□□ -0.4
USP9XQ93008 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
USP9XQ93008 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.53□□□□□ -0.4
USP9XQ93008 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
USP9XQ93008 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.53□□□□□ -0.4
USP9XQ93008 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 AC009093.10-201ENST00000641956 1442 ntBASIC12.53□□□□□ -0.4
USP9XQ93008 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 AP000244.1-201ENST00000424582 201 ntBASIC12.53□□□□□ -0.4
USP9XQ93008 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
USP9XQ93008 PSAT1P2-201ENST00000426107 972 ntBASIC12.53□□□□□ -0.4
USP9XQ93008 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.53□□□□□ -0.4
USP9XQ93008 TPT1P11-201ENST00000458482 498 ntBASIC12.53□□□□□ -0.4
USP9XQ93008 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC12.53□□□□□ -0.4
USP9XQ93008 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.53□□□□□ -0.4
USP9XQ93008 DBET-201ENST00000630918 3363 ntBASIC12.53□□□□□ -0.4
USP9XQ93008 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.53□□□□□ -0.4
USP9XQ93008 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
USP9XQ93008 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
USP9XQ93008 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
USP9XQ93008 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
USP9XQ93008 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
USP9XQ93008 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
USP9XQ93008 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms