Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TM9SF4Q92544 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TM9SF4Q92544 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TM9SF4Q92544 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TM9SF4Q92544 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
TM9SF4Q92544 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.96□□□□□ -0.18
TM9SF4Q92544 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TM9SF4Q92544 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.96□□□□□ -0.18
TM9SF4Q92544 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TM9SF4Q92544 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TM9SF4Q92544 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.96□□□□□ -0.18
TM9SF4Q92544 WASH3P-207ENST00000560956 1394 ntBASIC13.96□□□□□ -0.18
TM9SF4Q92544 AC015656.1-201ENST00000624209 3578 ntBASIC13.96□□□□□ -0.18
TM9SF4Q92544 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 INTS4P1-203ENST00000641008 3683 ntBASIC13.95□□□□□ -0.18
TM9SF4Q92544 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 MTHFR-210ENST00000641407 2387 ntBASIC13.95□□□□□ -0.18
TM9SF4Q92544 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 CICP11-201ENST00000434745 2827 ntBASIC13.95□□□□□ -0.18
TM9SF4Q92544 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 ACTG1P17-201ENST00000558391 1119 ntBASIC13.95□□□□□ -0.18
TM9SF4Q92544 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 RN7SL190P-201ENST00000582519 257 ntBASIC13.95□□□□□ -0.18
TM9SF4Q92544 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TM9SF4Q92544 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TM9SF4Q92544 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TM9SF4Q92544 AC079781.5-202ENST00000641784 3743 ntBASIC13.94□□□□□ -0.18
TM9SF4Q92544 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.94□□□□□ -0.18
TM9SF4Q92544 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms