Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 BTBD6P1-201ENST00000412176 1267 ntBASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 CICP12-201ENST00000455801 843 ntBASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 AC136759.1-202ENST00000530858 2194 ntBASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 AC018629.1-201ENST00000623381 1736 ntBASIC14.93□□□□□ -0.02
SHROOM3Q8TF72 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 FTLP1-201ENST00000449155 526 ntBASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SHROOM3Q8TF72 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 AL928921.2-201ENST00000641325 2442 ntBASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 OR2R1P-201ENST00000441404 914 ntBASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 RNMTL1P1-201ENST00000454103 560 ntBASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 EEF1DP1-201ENST00000585891 896 ntBASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 AC128714.1-201ENST00000637035 887 ntBASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 AL161932.2-201ENST00000435436 679 ntBASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.91□□□□□ -0.02
SHROOM3Q8TF72 CYP4F23P-201ENST00000593402 1579 ntBASIC14.9□□□□□ -0.02
SHROOM3Q8TF72 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHROOM3Q8TF72 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms