Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SNED1Q8TER0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNED1Q8TER0 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNED1Q8TER0 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 AL161932.2-201ENST00000435436 679 ntBASIC17.47■□□□□ 0.39
SNED1Q8TER0 PFN2-212ENST00000490975 858 ntTSL 4 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 KRT18P37-201ENST00000520711 1282 ntBASIC17.47■□□□□ 0.39
SNED1Q8TER0 AC140658.4-201ENST00000561990 352 ntBASIC17.47■□□□□ 0.39
SNED1Q8TER0 SNORD3B-1-201ENST00000577988 758 ntBASIC17.47■□□□□ 0.39
SNED1Q8TER0 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 AL021707.6-201ENST00000609212 491 ntBASIC17.47■□□□□ 0.39
SNED1Q8TER0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNED1Q8TER0 AC015688.4-201ENST00000580780 1647 ntBASIC17.47■□□□□ 0.39
SNED1Q8TER0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNED1Q8TER0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNED1Q8TER0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNED1Q8TER0 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNED1Q8TER0 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNED1Q8TER0 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNED1Q8TER0 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNED1Q8TER0 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNED1Q8TER0 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNED1Q8TER0 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNED1Q8TER0 AL132994.1-201ENST00000554098 400 ntBASIC17.47■□□□□ 0.39
SNED1Q8TER0 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SNED1Q8TER0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 LINC00554-201ENST00000564841 3011 ntBASIC17.46■□□□□ 0.39
SNED1Q8TER0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 BPIFB5P-201ENST00000457066 1099 ntBASIC17.46■□□□□ 0.39
SNED1Q8TER0 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 AC005740.1-201ENST00000515639 522 ntBASIC17.46■□□□□ 0.39
SNED1Q8TER0 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 AC092862.1-201ENST00000541534 533 ntBASIC17.46■□□□□ 0.39
SNED1Q8TER0 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNED1Q8TER0 AL627230.2-201ENST00000613254 655 ntBASIC17.46■□□□□ 0.39
SNED1Q8TER0 PLS3-210ENST00000626746 216 ntTSL 4 BASIC17.46■□□□□ 0.39
SNED1Q8TER0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
SNED1Q8TER0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.46■□□□□ 0.38
SNED1Q8TER0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
SNED1Q8TER0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SNED1Q8TER0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNED1Q8TER0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNED1Q8TER0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms