Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCUBE3Q8IX30 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCUBE3Q8IX30 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SCUBE3Q8IX30 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SCUBE3Q8IX30 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCUBE3Q8IX30 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.49■□□□□ 0.07
SCUBE3Q8IX30 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCUBE3Q8IX30 MIR600HG-201ENST00000449175 5984 ntBASIC15.49■□□□□ 0.07
SCUBE3Q8IX30 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCUBE3Q8IX30 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCUBE3Q8IX30 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.49■□□□□ 0.07
SCUBE3Q8IX30 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.49■□□□□ 0.07
SCUBE3Q8IX30 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCUBE3Q8IX30 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 TUBB1P2-201ENST00000422712 1306 ntBASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 TUBB1P1-201ENST00000503144 1300 ntBASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 AL035414.1-201ENST00000451327 857 ntBASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 SNX18-202ENST00000343017 3140 ntBASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 AC015802.1-201ENST00000588104 1449 ntBASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SCUBE3Q8IX30 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AL035696.2-201ENST00000407941 709 ntBASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 BTBD6P1-201ENST00000412176 1267 ntBASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 MTX1P1-201ENST00000440904 838 ntBASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 FAM86HP-204ENST00000513466 959 ntBASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 EMC4-208ENST00000559078 599 ntTSL 3 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms