Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 AC092865.6-201ENST00000642101 219 ntBASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 AGGF1P10-201ENST00000635005 2191 ntBASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 PCDHB17P-202ENST00000623466 3066 ntBASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 MARK2P9-201ENST00000430958 1727 ntBASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 AC011700.1-201ENST00000610409 2627 ntBASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 AC022400.8-201ENST00000623453 3599 ntBASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 AC026271.4-201ENST00000578214 1833 ntBASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 AC102953.2-201ENST00000609755 3026 ntBASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 MRPL3P1-201ENST00000400109 1033 ntBASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 AC007967.2-201ENST00000432613 625 ntBASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 AC145285.3-201ENST00000564603 959 ntBASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 AP001005.1-201ENST00000571755 1248 ntBASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 AC009474.1-201ENST00000455096 1565 ntBASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LYSMD2Q8IV50 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.92□□□□□ -0.34
LYSMD2Q8IV50 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms