Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DGCR5-201ENST00000399539 862 ntBASIC13.17□□□□□ -0.3
LRRC28Q86X40 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 KRT18P64-201ENST00000434946 1219 ntBASIC13.17□□□□□ -0.3
LRRC28Q86X40 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 MYCLP2-201ENST00000449268 967 ntBASIC13.17□□□□□ -0.3
LRRC28Q86X40 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 RN7SL692P-201ENST00000464677 288 ntBASIC13.17□□□□□ -0.3
LRRC28Q86X40 AC104596.2-201ENST00000512793 793 ntBASIC13.17□□□□□ -0.3
LRRC28Q86X40 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 AC123567.1-201ENST00000548294 1261 ntBASIC13.17□□□□□ -0.3
LRRC28Q86X40 CR383656.12-201ENST00000549567 513 ntBASIC13.17□□□□□ -0.3
LRRC28Q86X40 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 AL391069.4-201ENST00000609583 481 ntBASIC13.17□□□□□ -0.3
LRRC28Q86X40 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 AC063926.2-201ENST00000623766 1308 ntBASIC13.16□□□□□ -0.3
LRRC28Q86X40 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 NME2P1-201ENST00000426182 414 ntBASIC13.16□□□□□ -0.3
LRRC28Q86X40 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 AC036164.1-201ENST00000570544 333 ntBASIC13.16□□□□□ -0.3
LRRC28Q86X40 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 TMEM261P1-201ENST00000604899 340 ntBASIC13.16□□□□□ -0.3
LRRC28Q86X40 AC008494.3-201ENST00000606615 944 ntBASIC13.16□□□□□ -0.3
LRRC28Q86X40 AC012645.4-201ENST00000610691 1061 ntBASIC13.16□□□□□ -0.3
LRRC28Q86X40 AC007431.3-201ENST00000623221 587 ntBASIC13.16□□□□□ -0.3
LRRC28Q86X40 AL158212.4-201ENST00000624062 1286 ntBASIC13.16□□□□□ -0.3
LRRC28Q86X40 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LRRC28Q86X40 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC28Q86X40 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms