Protein–RNA interactions for Protein: Q86X02

CDR2L, Cerebellar degeneration-related protein 2-like, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2LQ86X02 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDR2LQ86X02 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
CDR2LQ86X02 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDR2LQ86X02 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 AC008132.1-202ENST00000342005 1389 ntBASIC16.01■□□□□ 0.15
CDR2LQ86X02 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.01■□□□□ 0.15
CDR2LQ86X02 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 AC011742.3-201ENST00000439053 820 ntBASIC16.01■□□□□ 0.15
CDR2LQ86X02 FAM58BP-201ENST00000439056 645 ntBASIC16.01■□□□□ 0.15
CDR2LQ86X02 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 AL035414.1-201ENST00000451327 857 ntBASIC16.01■□□□□ 0.15
CDR2LQ86X02 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 AC125604.1-201ENST00000496255 707 ntBASIC16.01■□□□□ 0.15
CDR2LQ86X02 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 AP001505.2-201ENST00000616815 443 ntBASIC16.01■□□□□ 0.15
CDR2LQ86X02 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 AL805961.1-203ENST00000641078 1258 ntBASIC16.01■□□□□ 0.15
CDR2LQ86X02 AC139749.1-202ENST00000617529 3139 ntBASIC16.01■□□□□ 0.15
CDR2LQ86X02 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDR2LQ86X02 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDR2LQ86X02 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16■□□□□ 0.15
CDR2LQ86X02 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CDR2LQ86X02 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CDR2LQ86X02 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CDR2LQ86X02 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 MIR769-201ENST00000390225 118 ntBASIC16■□□□□ 0.15
CDR2LQ86X02 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16■□□□□ 0.15
CDR2LQ86X02 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16■□□□□ 0.15
CDR2LQ86X02 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16■□□□□ 0.15
CDR2LQ86X02 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16■□□□□ 0.15
CDR2LQ86X02 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16■□□□□ 0.15
CDR2LQ86X02 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16■□□□□ 0.15
CDR2LQ86X02 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 RCC2P8-201ENST00000502779 1035 ntBASIC16■□□□□ 0.15
CDR2LQ86X02 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16■□□□□ 0.15
CDR2LQ86X02 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16■□□□□ 0.15
CDR2LQ86X02 AC009779.1-201ENST00000551138 283 ntBASIC16■□□□□ 0.15
CDR2LQ86X02 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16■□□□□ 0.15
CDR2LQ86X02 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CDR2LQ86X02 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16■□□□□ 0.15
CDR2LQ86X02 AC097724.1-201ENST00000609581 426 ntBASIC16■□□□□ 0.15
CDR2LQ86X02 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16■□□□□ 0.15
CDR2LQ86X02 AL136295.7-201ENST00000619226 1200 ntBASIC16■□□□□ 0.15
CDR2LQ86X02 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16■□□□□ 0.15
CDR2LQ86X02 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CDR2LQ86X02 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms