Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.84■□□□□ 0.29
USH1GQ495M9 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USH1GQ495M9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.84■□□□□ 0.29
USH1GQ495M9 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USH1GQ495M9 KHSRPP1-201ENST00000427983 1768 ntBASIC16.84■□□□□ 0.29
USH1GQ495M9 AC015656.1-201ENST00000624209 3578 ntBASIC16.84■□□□□ 0.29
USH1GQ495M9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.84■□□□□ 0.29
USH1GQ495M9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.84■□□□□ 0.29
USH1GQ495M9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.84■□□□□ 0.29
USH1GQ495M9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USH1GQ495M9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
USH1GQ495M9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
USH1GQ495M9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.83■□□□□ 0.28
USH1GQ495M9 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USH1GQ495M9 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USH1GQ495M9 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.83■□□□□ 0.28
USH1GQ495M9 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USH1GQ495M9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
USH1GQ495M9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
USH1GQ495M9 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USH1GQ495M9 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USH1GQ495M9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
USH1GQ495M9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USH1GQ495M9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.83■□□□□ 0.28
USH1GQ495M9 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.83■□□□□ 0.28
USH1GQ495M9 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.83■□□□□ 0.28
USH1GQ495M9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.83■□□□□ 0.28
USH1GQ495M9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USH1GQ495M9 UPF3AP2-201ENST00000457924 1132 ntBASIC16.83■□□□□ 0.28
USH1GQ495M9 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
USH1GQ495M9 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.83■□□□□ 0.28
USH1GQ495M9 IMP3P2-201ENST00000489760 475 ntBASIC16.83■□□□□ 0.28
USH1GQ495M9 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.83■□□□□ 0.28
USH1GQ495M9 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.83■□□□□ 0.28
USH1GQ495M9 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
USH1GQ495M9 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.83■□□□□ 0.28
USH1GQ495M9 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.83■□□□□ 0.28
USH1GQ495M9 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.83■□□□□ 0.28
USH1GQ495M9 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.83■□□□□ 0.28
USH1GQ495M9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
USH1GQ495M9 AC092299.1-201ENST00000632679 757 ntBASIC16.83■□□□□ 0.28
USH1GQ495M9 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
USH1GQ495M9 AC009093.10-201ENST00000641956 1442 ntBASIC16.83■□□□□ 0.28
USH1GQ495M9 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.83■□□□□ 0.28
USH1GQ495M9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
USH1GQ495M9 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
USH1GQ495M9 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.82■□□□□ 0.28
USH1GQ495M9 AL354702.1-201ENST00000442006 1960 ntBASIC16.82■□□□□ 0.28
USH1GQ495M9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
USH1GQ495M9 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
USH1GQ495M9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
USH1GQ495M9 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
USH1GQ495M9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.82■□□□□ 0.28
USH1GQ495M9 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
USH1GQ495M9 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
USH1GQ495M9 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
USH1GQ495M9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.82■□□□□ 0.28
USH1GQ495M9 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.82■□□□□ 0.28
USH1GQ495M9 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.82■□□□□ 0.28
USH1GQ495M9 ISCA2P1-201ENST00000425548 448 ntBASIC16.82■□□□□ 0.28
USH1GQ495M9 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.82■□□□□ 0.28
USH1GQ495M9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.82■□□□□ 0.28
USH1GQ495M9 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.82■□□□□ 0.28
USH1GQ495M9 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.82■□□□□ 0.28
USH1GQ495M9 AC105129.2-201ENST00000559536 390 ntBASIC16.82■□□□□ 0.28
USH1GQ495M9 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.82■□□□□ 0.28
USH1GQ495M9 FGFR3P5-201ENST00000564496 886 ntBASIC16.82■□□□□ 0.28
USH1GQ495M9 RN7SL574P-201ENST00000581512 297 ntBASIC16.82■□□□□ 0.28
USH1GQ495M9 AL157813.1-201ENST00000612996 587 ntBASIC16.82■□□□□ 0.28
USH1GQ495M9 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.82■□□□□ 0.28
USH1GQ495M9 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USH1GQ495M9 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.82■□□□□ 0.28
USH1GQ495M9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.82■□□□□ 0.28
USH1GQ495M9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.82■□□□□ 0.28
USH1GQ495M9 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USH1GQ495M9 AC018629.1-201ENST00000623381 1736 ntBASIC16.82■□□□□ 0.28
USH1GQ495M9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.81■□□□□ 0.28
USH1GQ495M9 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms