Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
CACNA1BQ00975 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CACNA1BQ00975 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 AP000244.1-201ENST00000424582 201 ntBASIC13.4□□□□□ -0.26
CACNA1BQ00975 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 RPSAP70-201ENST00000504462 864 ntBASIC13.4□□□□□ -0.26
CACNA1BQ00975 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 AC084364.1-201ENST00000551967 1556 ntBASIC13.4□□□□□ -0.26
CACNA1BQ00975 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.4□□□□□ -0.26
CACNA1BQ00975 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 MIR1249-201ENST00000408671 66 ntBASIC13.4□□□□□ -0.26
CACNA1BQ00975 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 HNRNPA1P7-201ENST00000521273 963 ntBASIC13.4□□□□□ -0.26
CACNA1BQ00975 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 RBM7-208ENST00000545678 867 ntTSL 3 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.4□□□□□ -0.26
CACNA1BQ00975 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CACNA1BQ00975 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.4□□□□□ -0.27
CACNA1BQ00975 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 AC124944.3-201ENST00000607976 1304 ntBASIC13.39□□□□□ -0.27
CACNA1BQ00975 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 RNVU1-8-201ENST00000364272 125 ntBASIC13.39□□□□□ -0.27
CACNA1BQ00975 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.39□□□□□ -0.27
CACNA1BQ00975 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 AP001505.1-201ENST00000569966 824 ntBASIC13.39□□□□□ -0.27
CACNA1BQ00975 RN7SL665P-201ENST00000578793 300 ntBASIC13.39□□□□□ -0.27
CACNA1BQ00975 URAHP-205ENST00000610227 398 ntBASIC13.39□□□□□ -0.27
CACNA1BQ00975 AC148476.1-201ENST00000622182 705 ntBASIC13.39□□□□□ -0.27
CACNA1BQ00975 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 BX322534.1-201ENST00000635574 241 ntBASIC13.39□□□□□ -0.27
CACNA1BQ00975 AC215524.1-201ENST00000635696 241 ntBASIC13.39□□□□□ -0.27
CACNA1BQ00975 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 SHMT1P1-201ENST00000419974 1312 ntBASIC13.39□□□□□ -0.27
CACNA1BQ00975 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 RN7SKP212-201ENST00000410851 328 ntBASIC13.39□□□□□ -0.27
CACNA1BQ00975 OR2R1P-201ENST00000441404 914 ntBASIC13.39□□□□□ -0.27
CACNA1BQ00975 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CACNA1BQ00975 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CACNA1BQ00975 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CACNA1BQ00975 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.38□□□□□ -0.27
CACNA1BQ00975 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CACNA1BQ00975 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CACNA1BQ00975 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CACNA1BQ00975 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CACNA1BQ00975 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.38□□□□□ -0.27
CACNA1BQ00975 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CACNA1BQ00975 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms