Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SUPT4H1P63272 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SUPT4H1P63272 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SUPT4H1P63272 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SUPT4H1P63272 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.14□□□□□ -0.47
SUPT4H1P63272 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SUPT4H1P63272 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SUPT4H1P63272 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SUPT4H1P63272 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SUPT4H1P63272 MARK2P9-201ENST00000430958 1727 ntBASIC12.14□□□□□ -0.47
SUPT4H1P63272 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SUPT4H1P63272 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
SUPT4H1P63272 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.14□□□□□ -0.47
SUPT4H1P63272 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SUPT4H1P63272 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SUPT4H1P63272 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 AC023141.5-201ENST00000458585 616 ntBASIC12.13□□□□□ -0.47
SUPT4H1P63272 YBX1P5-201ENST00000509441 847 ntBASIC12.13□□□□□ -0.47
SUPT4H1P63272 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 ZNF890P-202ENST00000530367 1156 ntBASIC12.13□□□□□ -0.47
SUPT4H1P63272 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 AC004835.2-201ENST00000603762 682 ntBASIC12.13□□□□□ -0.47
SUPT4H1P63272 AL596442.2-201ENST00000610240 980 ntBASIC12.13□□□□□ -0.47
SUPT4H1P63272 AP001002.3-201ENST00000623482 206 ntBASIC12.13□□□□□ -0.47
SUPT4H1P63272 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 AC125807.2-201ENST00000513358 3514 ntBASIC12.13□□□□□ -0.47
SUPT4H1P63272 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SUPT4H1P63272 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SUPT4H1P63272 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.12□□□□□ -0.47
SUPT4H1P63272 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.12□□□□□ -0.47
SUPT4H1P63272 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.12□□□□□ -0.47
SUPT4H1P63272 AP000437.1-201ENST00000624057 2085 ntBASIC12.12□□□□□ -0.47
SUPT4H1P63272 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 AL445209.1-201ENST00000607269 3491 ntBASIC12.12□□□□□ -0.47
SUPT4H1P63272 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SUPT4H1P63272 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.12□□□□□ -0.47
SUPT4H1P63272 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.12□□□□□ -0.47
SUPT4H1P63272 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.12□□□□□ -0.47
SUPT4H1P63272 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SUPT4H1P63272 MEIS3P1-201ENST00000495167 958 ntBASIC12.12□□□□□ -0.47
SUPT4H1P63272 GCOM2-201ENST00000509133 1104 ntBASIC12.12□□□□□ -0.47
SUPT4H1P63272 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms